Co-expression analysis

Gene ID Zm.11922.1.A1_at
Gene name transposon protein
Homology with ArabidopsisSimilar to At2g12190: cytochrome P450, putative (HF=1e-1)
Module size 41 genes
NF 0.26
%ile 22.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9699.80.93Zm.11922.1.A1_atCK370631transposon protein-1e-1At2g12190cytochrome P450, putativeO.I.H.G.S.X.
0.4861.30.95Zm.19158.2.S1_a_atBM073998hypothetical protein LOC100273021 /// thioredoxin F-type-3e-11At5g16400ATF2O.I.H.G.S.X.
0.4759.90.96Zm.15085.1.A1_atAI065806--4e-11At4g14070AAE15 (acyl-activating enzyme 15)O.I.H.G.S.X.
0.4556.40.95Zm.306.1.S1_s_atAF291748.1HMGI/Y protein /// high mobility group I/Y-2-2e+0At3g47620AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14)O.I.H.G.S.X.
0.4556.40.95Zm.16226.1.A1_atBM348522Hypothetical LOC542299-4e-1At2g20180PIL5 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 5)O.I.H.G.S.X.
0.4556.40.96Zm.12970.1.A1_atCO049279hypothetical protein LOC100193219-7e-7At3g10330transcription initiation factor IIB-2 / general transcription factor TFIIB-2 (TFIIB2)O.I.H.G.S.X.
0.4455.70.95Zm.4030.4.A1_atCF021557hypothetical protein LOC100194153-1e-19At3g6024560S ribosomal protein L37a (RPL37aC)O.I.H.G.S.X.
0.4251.30.94Zm.12026.1.A1_atBM382751--6e-1At5g02140thaumatin-like protein, putativeO.I.H.G.S.X.
0.3945.60.95Zm.10095.1.A1_atCF633991chloroplast small heat shock protein-2e+0At3g57062unknown proteinO.I.H.G.S.X.
0.3945.60.96Zm.4164.4.A1_x_atBM267227--3e+1At5g53180PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)O.I.H.G.S.X.
0.3844.20.95Zm.17295.1.A1_atCK347563--2e+0At2g18050HIS1-3 (HISTONE H1-3)O.I.H.G.S.X.
0.3742.30.94Zm.3706.1.S1_atCO526030hypothetical protein LOC100272244-2e-1At3g04080ATAPY1 (APYRASE 1)O.I.H.G.S.X.
0.3437.20.97Zm.5796.2.S1_atAY107655.1--3e-18At5g66420-O.I.H.G.S.X.
0.3233.40.95Zm.16394.1.S1_atCF272871--1e-1At2g03470myb family transcription factor / ELM2 domain-containing proteinO.I.H.G.S.X.
0.3233.40.95Zm.800.2.A1_atAI714523Phosphoenolpyruvate carboxylase-8e-5At3g14940ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)O.I.H.G.S.X.
0.3131.60.96Zm.17661.1.A1_atCK369350--1e+0At5g61410RPEO.I.H.G.S.X.
0.2928.10.96Zm.12431.1.S1_atAY106853.1hypothetical protein LOC100217105-4e+0At4g18400unknown proteinO.I.H.G.S.X.
0.2828.10.96Zm.18208.1.A1_atBM338077--4e+0At3g45245-O.I.H.G.S.X.
0.2828.10.97Zm.7858.1.A1_atAY108500.1--3e-3At1g70940PIN3 (PIN-FORMED 3)O.I.H.G.S.X.
0.2724.60.96Zm.11667.1.A1_atCF633574hypothetical protein LOC100274234-4e-1At4g39630unknown proteinO.I.H.G.S.X.
0.2724.60.95Zm.18673.1.A1_atCK828084BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-2e+0At3g59350serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.2622.70.95Zm.6050.1.S1_atAY108721.1hypothetical protein LOC100191969-4e-2At4g29930basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.2622.70.96Zm.3925.1.A1_atCF045284hypothetical protein LOC100273553-4e-8At1g31930XLG3 (extra-large GTP-binding protein 3)O.I.H.G.S.X.
0.2622.70.97Zm.19350.1.A1_atCO531475yip1 domain family member 6-2e-18At4g30260integral membrane Yip1 family proteinO.I.H.G.S.X.
0.2622.70.96Zm.17543.1.A1_atCK371034--6e+0At5g25240-O.I.H.G.S.X.
0.2521.30.95Zm.5714.1.A1_atBM382028hypothetical protein LOC100277385-4e-7At3g61080fructosamine kinase family proteinO.I.H.G.S.X.
0.2521.30.96Zm.18081.1.S1_atBM268388chorismate synthase 2-1e-7At1g48850EMB1144 (embryo defective 1144)O.I.H.G.S.X.
0.2419.80.95Zm.3828.1.A1_atAY105560.1hypothetical protein LOC100191702-2e+0At4g03540integral membrane family proteinO.I.H.G.S.X.
0.2318.60.96Zm.16687.1.S1_atCF636696hypothetical protein LOC100194066-3e-3At5g07250ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)O.I.H.G.S.X.
0.2216.90.94Zm.11441.1.S1_atAY672654.1ethylene-responsive factor-like protein 1-2e+0At3g14230RAP2.2O.I.H.G.S.X.
0.2216.90.96Zm.17516.1.S1_atCF623514hypothetical protein LOC100216611-3e-12At5g63650SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5)O.I.H.G.S.X.
0.2014.20.96Zm.11334.1.A1_atBM349015autophagy-related 4b-8e-2At2g44140autophagy 4a (APG4a)O.I.H.G.S.X.
0.1912.80.95Zm.10423.1.S1_atCN844467fatty acid desaturase8-6e-14At5g05580FAD8 (FATTY ACID DESATURASE 8)O.I.H.G.S.X.
0.1710.60.95Zm.4602.1.A1_atAI737296--1e-1At3g01280VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)O.I.H.G.S.X.
0.1710.60.95Zm.15077.1.A1_a_atCF057940--2e+0At5g08315-O.I.H.G.S.X.
0.169.40.96Zm.8040.1.A1_a_atBM073932hypothetical protein LOC100274921-1e+0At5g46620unknown proteinO.I.H.G.S.X.
0.158.60.96Zm.17504.1.A1_atBG873838--5e-1At2g37150zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.147.70.97Zm.18278.1.S1_atCK371368--1e-26At3g52200LTA3O.I.H.G.S.X.
0.136.80.96Zm.3707.1.A1_atAY107773.1vacuolar cation/proton exchanger 2-1e-4At3g13320CAX2 (CATION EXCHANGER 2)O.I.H.G.S.X.
0.115.30.97Zm.1940.1.S1_atAW507032--5e-1At4g13615four F5 protein-related / 4F5 protein-relatedO.I.H.G.S.X.
0.104.60.96Zm.3735.1.A1_atAY107167.1hypothetical protein LOC100277155-5e-8At4g39860unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.398.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.997.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320444protocol: mRNA - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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