Co-expression analysis

Gene ID Zm.11920.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g03020: unknown protein (HF=2e-2)
Module size 12 genes
NF 0.39
%ile 43.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6481.70.93Zm.11920.1.A1_atBM381842--2e-2At3g03020unknown proteinO.I.H.G.S.X.
0.6077.80.95Zm.14391.1.A1_atCA998702hypothetical protein LOC100273626-1e-7At4g02630protein kinase family proteinO.I.H.G.S.X.
0.5976.10.95Zm.15550.1.S1_a_atAI491343hypothetical protein LOC100191653 /// protein phosphatase 2C-5e-9At5g66080protein phosphatase 2C family protein / PP2C family proteinO.I.H.G.S.X.
0.5976.10.96Zm.19008.1.A1_atCF011535--6e-3At4g36770UDP-glycosyltransferase/ transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.3945.60.96Zm.3591.2.A1_atAW498095hypothetical protein LOC100280276-5e-2At3g16500PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1)O.I.H.G.S.X.
0.3538.90.96Zm.4497.1.A1_atBM336128hypothetical protein LOC100193897-7e-1At2g20940unknown proteinO.I.H.G.S.X.
0.3336.00.95Zm.5274.1.S1_atCD990782triose phosphate/phosphate translocator, non-green plastid,chloroplast-4e-18At5g33320CUE1 (CAB UNDEREXPRESSED 1)O.I.H.G.S.X.
0.3336.00.95Zm.9654.1.A1_atBM351433--3e-1At2g44420protein N-terminal asparagine amidohydrolase family proteinO.I.H.G.S.X.
0.3029.80.95Zm.4300.2.S1_a_atAI881611hypothetical protein LOC100274411-3e-8At5g09880RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.2928.10.95Zm.3492.1.A1_atBG550327hypothetical protein LOC100275578-2e-1At1g16490MYB58 (MYB DOMAIN PROTEIN 58)O.I.H.G.S.X.
0.2928.10.95Zm.5131.1.A1_atAI600972--5e+0At5g49620AtMYB78 (myb domain protein 78)O.I.H.G.S.X.
0.2828.10.95Zm.11178.1.A1_atAI745736--5e-1At5g28490LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.499.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.599.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.198.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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