Co-expression analysis

Gene ID Zm.11868.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g22380: anac090 (Arabidopsis NAC domain containing protein 90) (HF=1e+0)
Module size 18 genes
NF 0.30
%ile 27.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8796.40.82Zm.11868.1.A1_atBM381367--1e+0At5g22380anac090 (Arabidopsis NAC domain containing protein 90)O.I.H.G.S.X.
0.6077.80.91Zm.10472.1.A1_atAY112022.1Hypothetical protein LOC100216888-3e-12At1g80780CCR4-NOT transcription complex protein, putativeO.I.H.G.S.X.
0.4861.30.86Zm.18512.1.A1_atCO518706hypothetical protein LOC100280076-2e+1At3g58000VQ motif-containing proteinO.I.H.G.S.X.
0.4759.90.86Zm.19050.1.S1_atCA829470hypothetical protein LOC100274252-5e+0At5g01880zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4455.70.92Zm.1829.1.S1_atAY103809.1--3e+0At5g17710EMB1241 (embryo defective 1241)O.I.H.G.S.X.
0.4149.70.90Zm.18531.1.A1_atBE575145hypothetical protein LOC100192889-2e+0At4g21280oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ)O.I.H.G.S.X.
0.4048.50.90Zm.4193.1.A1_atAY106195.1DANA2-7e+0At5g19810proline-rich extensin-like family proteinO.I.H.G.S.X.
0.3945.60.90Zm.1006.1.A1_atBE639439--1e-16At2g14050MCM9O.I.H.G.S.X.
0.3742.30.90Zm.8060.1.A1_atBQ538589nodulin protein-2e-1At3g13857unknown proteinO.I.H.G.S.X.
0.3742.30.91Zm.8671.1.A1_atCO525023hypothetical protein LOC100272947-1e+0At1g70830MLP28 (MLP-LIKE PROTEIN 28)O.I.H.G.S.X.
0.2928.10.91Zm.18561.1.A1_atCO517421hypothetical protein LOC100193602-1e-1At5g04660CYP77A4O.I.H.G.S.X.
0.2928.10.92Zm.6734.2.S1_x_atCD439610--2e+0At4g13140-O.I.H.G.S.X.
0.2622.70.92Zm.5253.1.S1_atBM08061960S ribosomal protein L34-5e-19At3g2890060S ribosomal protein L34 (RPL34C)O.I.H.G.S.X.
0.2419.80.90Zm.14068.1.S1_atAI920492vacuolar protein-sorting protein 45-2e-23At1g77140VPS45 (VACUOLAR PROTEIN SORTING 45)O.I.H.G.S.X.
0.2318.60.88Zm.9894.1.A1_atBM347660--5e-1At1g71500Rieske (2Fe-2S) domain-containing proteinO.I.H.G.S.X.
0.2014.20.91Zm.1723.1.A1_atBG841588--8e+0At2g42130unknown proteinO.I.H.G.S.X.
0.1710.60.85Zm.9438.1.A1_atBM268881--2e-7At4g31770calcineurin-like phosphoesterase family proteinO.I.H.G.S.X.
0.083.40.87Zm.13928.1.A1_atU03679.1--3e+0At4g36460unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.698.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM205367Mo17xB73 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
8.298.0GSM205365Mo17 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
8.298.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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