Co-expression analysis

Gene ID	Zm.11862.1.A1_at
Gene name	hypothetical protein LOC100275637
Homology with Arabidopsis	Similar to At2g40440: BTB/POZ domain-containing protein (HF=2e-1)
Module size	6 genes
NF	0.65
%ile	86.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.2	0.95	Zm.11862.1.A1_at	AW566292	hypothetical protein LOC100275637	-	2e-1	At2g40440	BTB/POZ domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.97	Zm.10105.1.A1_at	BM379807	-	-	5e+0	At4g11870	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.97	Zm.564.1.S1_a_at	AF244704.1	glutathione S-transferase GST 39	-	3e-2	At2g36640	ATECP63 (EMBRYONIC CELL PROTEIN 63)	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.97	Zm.4467.1.S1_a_at	AW054142	hypothetical protein LOC100193777	-	1e-5	At1g36280	adenylosuccinate lyase, putative / adenylosuccinase, putative	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.97	Zm.3613.1.A1_at	BG841007	hypothetical protein LOC100273532	-	4e-24	At5g10540	peptidase M3 family protein / thimet oligopeptidase family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.96	Zm.1937.1.S1_at	CN845484	hypothetical protein LOC100277662	-	5e+0	At3g50800	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.5	99.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.7	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.1	98.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3	98.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.8	97.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.9	93.8	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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