Co-expression analysis

Gene ID	Zm.11822.1.A1_at
Gene name	hypothetical protein LOC100217292
Homology with Arabidopsis	Similar to At5g62030: diphthamide synthesis DPH2 family protein (HF=2e+1)
Module size	16 genes
NF	0.27
%ile	22.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.95	Zm.11822.1.A1_at	BM381027	hypothetical protein LOC100217292	-	2e+1	At5g62030	diphthamide synthesis DPH2 family protein	O.I.	H.G.	S.X.	Please select
0.37	42.3	0.96	Zm.11650.1.A1_at	BM379683	hypothetical protein LOC100192105	-	4e+0	At2g12405	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.97	Zm.2234.3.A1_a_at	CO526105	hypothetical protein LOC100273895	-	9e-9	At4g17180	glycosyl hydrolase family 17 protein	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.96	Zm.18460.1.S1_at	CO521354	hypothetical protein LOC100216873	-	8e-3	At1g60430	ARPC3 (actin-related protein C3)	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.97	Zm.13712.1.S1_at	AY106534.1	-	-	4e+0	At2g46640	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.96	Zm.19135.1.A1_at	CO526574	-	-	2e-1	At3g17730	anac057 (Arabidopsis NAC domain containing protein 57)	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.95	Zm.7847.1.A1_at	BM080149	-	-	1e+0	At3g27416	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.95	Zm.13208.1.S1_at	CA402017	protein binding protein	-	2e-1	At1g07000	ATEXO70B2 (exocyst subunit EXO70 family protein B2)	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.97	Zm.12065.1.S1_at	CD219268	hypothetical protein LOC100275823	-	5e-1	At5g52605	-	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.94	Zm.15333.1.S1_at	CO519768	hypothetical protein LOC100216740	-	3e-6	At3g07940	zinc finger and C2 domain protein, putative	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.97	Zm.8996.1.A1_at	AY109834.1	-	-	5e-2	At5g38110	ASF1B (ANTI- SILENCING FUNCTION 1B)	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.97	Zm.9649.1.A1_at	BM337167	hypothetical protein LOC100277264	-	1e+0	At1g43720	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.98	Zm.16056.1.S1_at	CD994891	hypothetical protein LOC100279380	-	1e-3	At3g11120	60S ribosomal protein L41 (RPL41E)	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.97	Zm.18885.1.A1_at	CO530040	hypothetical protein LOC100276818	-	3e+0	At5g28780	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.96	Zm.4122.1.S1_at	AY107878.1	-	-	2e+0	At5g07490	unknown protein	O.I.	H.G.	S.X.	Please select
0.09	4.0	0.97	Zm.14622.2.S1_at	CO534180	ubiquinone biosynthesis methyltransferase COQ5	-	1e-5	At5g57300	UbiE/COQ5 methyltransferase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.5	99.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.7	99.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.5	99.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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