Co-expression analysis

Gene ID Zm.11797.1.A1_at
Gene name hypothetical protein LOC100277496
Homology with ArabidopsisSimilar to At5g16390: CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1) (HF=6e+0)
Module size 9 genes
NF 0.51
%ile 64.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6481.70.89Zm.11797.1.A1_atBM380828hypothetical protein LOC100277496-6e+0At5g16390CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)O.I.H.G.S.X.
0.7892.50.93Zm.14670.1.S1_atBM381336hypothetical protein LOC100193527-8e-5At3g05280integral membrane Yip1 family proteinO.I.H.G.S.X.
0.6785.80.93Zm.12506.1.S1_atAY111499.1--4e-1At5g43210endo/excinuclease amino terminal domain-containing proteinO.I.H.G.S.X.
0.6785.80.94Zm.4677.1.S1_atAY105413.1--9e-1At3g18260reticulon family protein (RTNLB9)O.I.H.G.S.X.
0.5571.60.93Zm.10477.1.S1_atCF010434nitrate-induced NOI protein-6e-3At5g63270nitrate-responsive NOI protein, putativeO.I.H.G.S.X.
0.5369.10.94Zm.18775.1.A1_atBM074499calcium/calmodulin dependent protein kinase-like-2e+0At1g07950surfeit locus protein 5 family protein / SURF5 family proteinO.I.H.G.S.X.
0.4048.50.94Zm.2825.3.A1_a_atCB350765hypothetical protein LOC100192808 /// hypothetical protein LOC100272443 /// hypothetical protein LOC100273769-3e-29At1g22450COX6B (CYTOCHROME C OXIDASE 6B)O.I.H.G.S.X.
0.3844.20.90Zm.1179.1.S1_atAJ006539hypothetical protein LOC100273704-1e+1At5g63030glutaredoxin, putativeO.I.H.G.S.X.
0.2318.60.94Zm.6445.1.A1_atAI692009--1e+1At5g04238unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.798.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320470protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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