Co-expression analysis

Gene ID Zm.11783.1.A1_at
Gene name hypothetical protein LOC100191487
Homology with ArabidopsisSimilar to At5g42510: disease resistance-responsive family protein (HF=4e+0)
Module size 6 genes
NF 0.71
%ile 92.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.97Zm.11783.1.A1_atBM380733hypothetical protein LOC100191487-4e+0At5g42510disease resistance-responsive family proteinO.I.H.G.S.X.
0.8094.00.97Zm.2784.1.A1_atCF629950hypothetical protein LOC100276915-5e-8At5g17420IRX3 (IRREGULAR XYLEM 3)O.I.H.G.S.X.
0.5775.10.95Zm.2901.1.A1_atBM351614hypothetical protein LOC100277716-2e+0At5g58784dehydrodolichyl diphosphate synthaseO.I.H.G.S.X.
0.5775.10.96Zm.11378.1.A1_atCB351158hypothetical protein LOC100272914-6e-1At5g06610unknown proteinO.I.H.G.S.X.
0.5775.10.96Zm.390.1.S1_atU32579.1dwarf plant3-4e+0At4g39260GR-RBP8O.I.H.G.S.X.
0.5571.60.96Zm.6948.1.A1_atAW288752serine/threonine-protein phosphatase PP1-8e-12At2g29400TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.298.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM202310B73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
3.895.5GSM202320B73 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os01g0948500, orthologous to the query gene, Zm.11783.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5676.3Os01g0948500At5g42510-ARM repeat fold domain containing protein3e-1At4g00590asparaginase 2 family proteinO.I.H.G.S.X.
0.5371.3Os07g0622000At5g42510-Abscisic acid-inducible protein kinase (EC2.7.1.-) (Fragment)1e-39At4g33950OST1 (OPEN STOMATA 1)O.I.H.G.S.X.
0.4458.1Os02g0437200At5g42510-SNAP-341e+0At1g68760ATNUDX1 (ARABIDOPSIS THALIANA NUDIX HYDROLASE 1)O.I.H.G.S.X.
0.4253.9Os05g0393100At5g42510-Leucine-rich repeat, plant specific containingprotein1e+0At4g23580kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.3745.0Os10g0574700At5g42510-Protein of unknown function DUF597 family protein4e-2At4g17900zinc-binding family proteinO.I.H.G.S.X.
0.3745.0Os03g0187600At5g42510-GRAM domain containing protein6e-1At1g28200FIP1 (FH INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.3236.3Os02g0787800At5g42510-Diacylglycerol kinase, catalytic region domaincontaining protein1e-12At2g18730diacylglycerol kinase, putativeO.I.H.G.S.X.
0.3032.7Os03g0703400At5g42510-MAP3K beta 3 protein kinase (EC 2.7.1.37)(Fragment)8e-2At1g63700YDA (YODA)O.I.H.G.S.X.
0.2931.1Os12g0131100At5g42510-Glucosamine--fructose-6-phosphate aminotransferase[isomerizing] (EC 2.6.1.16) (Hexosephosphateaminotransferase) (D-fructose-6- phosphateamidotransferase) (GFAT)3e-12At3g24090glutamine-fructose-6-phosphate transaminase (isomerizing)/ sugar binding / transaminaseO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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