Co-expression analysis

Gene ID	Zm.11765.1.A1_at
Gene name	galactosyltransferase/ transferase, transferring hexosyl groups
Homology with Arabidopsis	Similar to At4g21060: galactosyltransferase family protein (HF=7e-6)
Module size	6 genes
NF	0.11
%ile	6.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.2	0.91	Zm.11765.1.A1_at	CD441156	galactosyltransferase/ transferase, transferring hexosyl groups	-	7e-6	At4g21060	galactosyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.90	Zm.17936.1.S1_at	CO518729	protein binding protein	-	6e-14	At3g47990	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.91	Zm.11819.1.A1_at	CO518214	protein kinase domain containing protein	-	4e-1	At2g35700	ERF38 (ERF FAMILY PROTEIN 38)	O.I.	H.G.	S.X.	Please select
0.12	5.9	0.91	Zm.9468.1.S1_at	AY108678.1	hypothetical protein LOC100276825	-	2e-13	At1g73350	unknown protein	O.I.	H.G.	S.X.	Please select
0.09	4.0	0.91	Zm.12705.1.S1_at	CD440320	-	-	7e-10	At5g20160	ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	O.I.	H.G.	S.X.	Please select
0.04	1.5	0.91	Zm.19316.1.A1_at	CO523375	-	-	1e+0	At3g05860	MADS-box protein (AGL45)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.3	98.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.6	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.5	98.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.0	98.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.7	98.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1	98.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.0	98.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.5	98.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.7	95.4	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.212738.1.S1_at, orthologous to the query gene, Zm.11765.1.A1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	92.6	PtpAffx.212738.1.S1_at	At4g21060	hypothetical protein	-	4e-34	At1g74800	galactosyltransferase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.32	55.2	PtpAffx.220005.1.S1_at	At4g21060	hypothetical protein	-	1e-68	At5g41150	UVH1 (ULTRAVIOLET HYPERSENSITIVE 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.20	34.6	PtpAffx.133784.1.A1_at	At4g21060	hypothetical protein	-	6e+0	Atcg00650	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.12	19.6	PtpAffx.200346.1.S1_at	At4g21060	hypothetical protein	-	3e-40	At5g41990	WNK8 (WITH NO LYSINE (K) KINASE 8)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.09	14.6	PtpAffx.220114.1.S1_x_at	At4g21060	hypothetical protein	-	1e-2	At1g33520	MOS2 (modifier of snc1, 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.06	9.8	Ptp.5058.1.A1_at	At4g21060	hypothetical protein	-	9e-15	At2g14170	ALDH6B2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

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