CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Zm.11765.1.A1_at

Gene name galactosyltransferase/ transferase, transferring hexosyl groups
Homology with Arabidopsis Similar to At4g21060: galactosyltransferase family protein (HF=7e-6)

Module size 6 genes

NF 0.11

%ile 6.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.71 88.2 0.91 Zm.11765.1.A1_at CD441156 galactosyltransferase/ transferase, transferring hexosyl groups - 7e-6 At4g21060 galactosyltransferase family protein O.I. H.G. S.X.
0.44 55.7 0.90 Zm.17936.1.S1_at CO518729 protein binding protein - 6e-14 At3g47990 zinc finger (C3HC4-type RING finger) family protein O.I. H.G. S.X.
0.21 15.5 0.91 Zm.11819.1.A1_at CO518214 protein kinase domain containing protein - 4e-1 At2g35700 ERF38 (ERF FAMILY PROTEIN 38) O.I. H.G. S.X.
0.12 5.9 0.91 Zm.9468.1.S1_at AY108678.1 hypothetical protein LOC100276825 - 2e-13 At1g73350 unknown protein O.I. H.G. S.X.
0.09 4.0 0.91 Zm.12705.1.S1_at CD440320 - - 7e-10 At5g20160 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein O.I. H.G. S.X.
0.04 1.5 0.91 Zm.19316.1.A1_at CO523375 - - 1e+0 At3g05860 MADS-box protein (AGL45) O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.3 98.9 GSM320455 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.6 98.8 GSM320453 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.5 98.7 GSM320448 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.0 98.6 GSM320454 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.7 98.6 GSM320449 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1 98.5 GSM320451 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.0 98.5 GSM320450 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7 98.5 GSM320447 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.5 98.4 GSM320452 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.7 95.4 GSM320456 protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At4g21060, orthologous to the query gene, Zm.11765.1.A1_at

VF %ile Gene ID Repr. ID Gene Name Func. O.I. H.G. S.X. Other DB
0.89 94.6 At4g21060 827853 galactosyltransferase family protein F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:membrane;MPOFB O.I. H.G. S.X.
0.67 81.6 At3g60040 825174 F-box family protein F:nucleic acid binding;P:N-terminal protein myristoylation;C:plasma membrane;POMFBA O.I. H.G. S.X.
0.50 65.3 At5g65560 836682 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBA O.I. H.G. S.X.
0.33 38.1 At5g42400 834246 SDG25 (SET DOMAIN PROTEIN 25) F:unknown;P:unknown;C:unknown;MOPFBAV O.I. H.G. S.X.
0.07 1.9 At2g31970 817756 RAD50 F:zinc ion binding, ATP binding, nuclease activity;P:DNA repair;C:chromosome, Mre11 complex;MOBFPAV O.I. H.G. S.X.

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera

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