Co-expression analysis

Gene ID Zm.11759.1.S1_at
Gene name cellulose synthase10
Homology with ArabidopsisSimilar to At5g17420: IRX3 (IRREGULAR XYLEM 3) (HF=3e-8)
Module size 8 genes
NF 0.25
%ile 20.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.95Zm.11759.1.S1_atAY372244.1cellulose synthase10-3e-8At5g17420IRX3 (IRREGULAR XYLEM 3)O.I.H.G.S.X.
0.3336.00.97Zm.6856.1.A1_atAI065480hypothetical protein LOC100274162-1e+0At1g36622unknown proteinO.I.H.G.S.X.
0.3336.00.97Zm.13430.1.A1_atAY110858.1invertase cell wall4-2e-5At3g52600AtcwINV2 (Arabidopsis thaliana cell wall invertase 2)O.I.H.G.S.X.
0.3029.80.97Zm.9271.1.A1_atBM269327--1e+0At5g11000unknown proteinO.I.H.G.S.X.
0.2318.60.97Zm.12645.1.S1_atBU097696--4e-4At4g17670senescence-associated protein-relatedO.I.H.G.S.X.
0.2115.50.96Zm.10528.1.A1_atAY107306.1oxidoreductase-1e+0At3g56130biotin/lipoyl attachment domain-containing proteinO.I.H.G.S.X.
0.2014.20.97ZmAffx.707.1.A1_atAI738220transposon protein-8e-1At5g03310auxin-responsive family proteinO.I.H.G.S.X.
0.104.60.96Zm.5165.1.A1_atAI715001gpm6 protein-5e+0At5g0385040S ribosomal protein S28 (RPS28B)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.298.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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