Co-expression analysis

Gene ID	Zm.11694.1.A1_at
Gene name	R2R3MYB-domain protein
Homology with Arabidopsis	Similar to At3g12820: AtMYB10 (myb domain protein 10) (HF=2e-5)
Module size	8 genes
NF	0.50
%ile	64.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.99	Zm.11694.1.A1_at	CK369414	R2R3MYB-domain protein	-	2e-5	At3g12820	AtMYB10 (myb domain protein 10)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.99	Zm.13919.1.A1_at	AF057523.1	hypoxically induced transcript 3	-	5e+0	At5g04210	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.99	Zm.470.1.A1_at	AF145755.1	THA4	-	2e+0	At5g28750	thylakoid assembly protein, putative	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.99	ZmAffx.296.1.S1_at	AI670429	-	-	8e-1	At2g37950	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.48	61.3	0.99	Zm.5791.2.A1_at	AW438331	-	-	2e-2	At4g23570	SGT1A	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.99	Zm.13919.1.S1_at	AF057523.1	hypoxically induced transcript 3	-	5e+0	At5g04210	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.39	45.6	0.99	Zm.8097.1.A1_at	BM336868	-	-	2e+0	At3g21940	receptor protein kinase-related	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.99	Zm.5406.1.S1_at	BM337472	-	-	2e-6	At1g11240	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
22.7	99.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.3	99.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.3	99.1	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.2	99.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.1	99.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.2	98.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.9	98.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.9	98.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM320464	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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