Co-expression analysis

Gene ID	Zm.11663.1.A1_at
Gene name	hypothetical protein LOC100273622
Homology with Arabidopsis	Similar to At4g28170: unknown protein (HF=2e+0)
Module size	6 genes
NF	0.64
%ile	85.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	65.7	0.92	Zm.11663.1.A1_at	CO531620	hypothetical protein LOC100273622	-	2e+0	At4g28170	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.90	Zm.13283.1.S1_at	CA826693	-	-	4e+0	At1g04778	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.90	Zm.1967.1.A1_at	BG836522	pathogenesis-related protein 10 /// pathogenesis-related protein 1	-	1e-23	At1g77180	chromatin protein family	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.89	Zm.11909.1.A1_at	BM381708	-	-	4e+0	At5g42146	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.93	Zm.1506.1.A1_at	X82184.1	defence-related protein	-	1e-1	At3g04720	PR4 (PATHOGENESIS-RELATED 4)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.94	Zm.9567.1.S1_at	BM378205	-	-	5e-10	At5g10780	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.7	96.5	GSM206307	Lower pulvinus 5 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.3	96.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.2	96.0	GSM206299	Left pulvinus control polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.1	95.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.0	95.8	GSM206295	Lower pulvinus 5 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.6	95.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM206288	Upper pulvinus 2 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.4	94.9	GSM206305	Right pulvinus control polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.3	94.7	GSM206308	Lower pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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