Co-expression analysis

Gene ID Zm.11547.1.S1_at
Gene name hypothetical protein LOC100276375
Homology with ArabidopsisSimilar to At5g41520: 40S ribosomal protein S10 (RPS10B) (HF=1e+1)
Module size 8 genes
NF 0.62
%ile 83.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4455.70.98Zm.11547.1.S1_atCA827895hypothetical protein LOC100276375-1e+1At5g4152040S ribosomal protein S10 (RPS10B)O.I.H.G.S.X.
0.7892.50.98Zm.9290.1.A1_atAY108360.1hypothetical protein LOC100192546-7e-1At5g58260-O.I.H.G.S.X.
0.7490.30.98Zm.14792.1.A1_atAI666236--4e+0At3g62340WRKY68O.I.H.G.S.X.
0.6785.80.98Zm.6228.1.A1_atAI739920--1e+0At1g64370unknown proteinO.I.H.G.S.X.
0.6785.80.98Zm.17724.1.S1_a_atCF623515hypothetical protein LOC100278419-1e+0At3g56240CCH (COPPER CHAPERONE)O.I.H.G.S.X.
0.6077.80.98Zm.18278.1.S1_atCK371368--1e-26At3g52200LTA3O.I.H.G.S.X.
0.5065.70.98Zm.13417.1.A1_atCA400681hypothetical protein LOC100193979-4e-1At3g05830-O.I.H.G.S.X.
0.5065.70.98Zm.12433.1.S1_s_atAY105016.1tyrosyl-tRNA synthetase-4e-18At2g33840tRNA synthetase class I (W and Y) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.798.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.398.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM258194Oh43 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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