Co-expression analysis

Gene ID Zm.11469.2.A1_a_at
Gene name hypothetical protein LOC100279920
Homology with ArabidopsisSimilar to At3g20900: unknown protein (HF=4e+0)
Module size 6 genes
NF 0.24
%ile 19.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5065.70.93Zm.11469.2.A1_a_atCF630843hypothetical protein LOC100279920-4e+0At3g20900unknown proteinO.I.H.G.S.X.
0.4658.40.94Zm.15790.1.S1_atAY109814.1SWIb domain-containing protein-1e-1At4g26810SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.4048.50.94Zm.2157.1.A1_a_atCA452419ribosomal protein S11-4e-39At4g3080040S ribosomal protein S11 (RPS11B)O.I.H.G.S.X.
0.3844.20.94Zm.12936.1.A1_atAY108987.1--7e-1At3g21338unknown proteinO.I.H.G.S.X.
0.3538.90.95Zm.678.1.S1_atAF302187.1sucrose export defective1-4e-15At4g32770VTE1 (VITAMIN E DEFICIENT 1)O.I.H.G.S.X.
0.083.40.93Zm.7727.2.S1_atCF972330--1e-1At4g13800permease-relatedO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4455.70.91Zm.6302.1.A1_atCO533765hypothetical protein LOC100192816-4e-1At2g03090ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)O.I.H.G.S.X.
0.4455.70.93ZmAffx.61.1.S1_atAI665105--9e-13At5g62840phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.H.G.S.X.
0.4455.70.93Zm.4986.1.S1_atBG873746hypothetical protein LOC100279549-2e-91At3g29360UDP-glucose 6-dehydrogenase, putativeO.I.H.G.S.X.
0.4048.50.92Zm.17361.1.S1_atCK370908--5e-19At3g55320PGP20 (P-GLYCOPROTEIN 20)O.I.H.G.S.X.
0.4048.50.94Zm.12511.1.S1_atAW062063hypothetical protein LOC100276976-5e+0At5g53110-O.I.H.G.S.X.
0.3538.90.91Zm.3498.1.A1_a_atCK367906metallothionein1-2e+0At5g64690neurofilament triplet H protein-relatedO.I.H.G.S.X.
0.3336.00.92Zm.1550.1.A1_atCD972755hypothetical protein LOC100194140-1e+1Atmg01020-O.I.H.G.S.X.
0.3233.40.91Zm.4605.1.A1_atAI795719--1e-4At1g64350SEH1HO.I.H.G.S.X.
0.3131.60.95Zm.16281.2.S1_atCA409032Histone H3.2-9e-21At5g10980histone H3O.I.H.G.S.X.
0.2928.10.88Zm.4351.1.A1_atAI861482hypothetical protein LOC100191604-2e-1At1g10040unknown proteinO.I.H.G.S.X.
0.2724.60.90Zm.13483.1.S1_atCO528023Hypothetical protein LOC100192840-2e+0At3g29970germination protein-relatedO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.598.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.391.7GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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