Co-expression analysis

Gene ID Zm.11259.1.A1_at
Gene name m19 protein
Homology with ArabidopsisSimilar to At4g18960: AG (AGAMOUS) (HF=1e-2)
Module size 6 genes
NF 0.68
%ile 89.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.80.97Zm.11259.1.A1_atAI966828m19 protein-1e-2At4g18960AG (AGAMOUS)O.I.H.G.S.X.
0.8094.00.96Zm.7341.1.A1_atBM267652TFIIB-related protein-2e-14At4g36650ATPBRP (PLANT-SPECIFIC TFIIB-RELATED PROTEIN)O.I.H.G.S.X.
0.7389.90.96Zm.5990.2.A1_atAI834730--8e+0At5g59510RTFL5 (ROTUNDIFOLIA LIKE 5)O.I.H.G.S.X.
0.6785.80.97Zm.7073.2.A1_atAI600777--1e-2At5g37260RVE2 (REVEILLE 2)O.I.H.G.S.X.
0.4658.40.97Zm.599.2.S1_a_atAY111360.1chromomethylase-2e+0At3g30350unknown proteinO.I.H.G.S.X.
0.4455.70.97Zm.11269.1.A1_atCK347607EF hand family protein-6e+0At2g22460unknown proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5571.60.92Zm.7074.1.A1_atCF634632--2e-3At4g09320NDPK1O.I.H.G.S.X.
0.5065.70.98Zm.599.2.A1_atAY111360.1Chromomethylase-2e+0At3g30350unknown proteinO.I.H.G.S.X.
0.4352.80.90Zm.2254.1.S1_atAW330764hypothetical protein LOC100275361-3e-1At1g62840unknown proteinO.I.H.G.S.X.
0.4048.50.95Zm.8993.1.A1_a_atAI649732hypothetical protein LOC100194128 /// hypothetical protein LOC100194385-2e-27At5g57655xylose isomerase family proteinO.I.H.G.S.X.
0.3844.20.94Zm.3899.1.A1_atAW061967hypothetical protein LOC100194083-6e-1At1g12810proline-rich family proteinO.I.H.G.S.X.
0.3336.00.96Zm.10824.1.S1_atAY112360.1Hypothetical protein LOC100192632-6e-10At1g05170galactosyltransferase family proteinO.I.H.G.S.X.
0.2115.50.92Zm.15899.3.A1_x_atAW172030early nodulin 93-9e-1At1g31760SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.2115.50.97Zm.1584.1.A1_atCO524456hypothetical protein LOC100273018-1e-10At4g28706pfkB-type carbohydrate kinase family proteinO.I.H.G.S.X.
0.1912.80.90Zm.6686.1.A1_atAY107202.1hypothetical protein LOC100191645-3e-3At4g16580catalyticO.I.H.G.S.X.
0.1811.60.90Zm.1126.1.A1_atAI691779hypothetical protein LOC100276330-2e+0At3g51632CPuORF44 (Conserved peptide upstream open reading frame 44)O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.197.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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