Co-expression analysis

Gene ID Zm.11250.1.A1_at
Gene name hypothetical protein LOC100273841
Homology with ArabidopsisSimilar to At5g07560: GRP20 (GLYCINE-RICH PROTEIN 20) (HF=3e-1)
Module size 7 genes
NF 0.75
%ile 95.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.80.92Zm.11250.1.A1_atBM341159hypothetical protein LOC100273841-3e-1At5g07560GRP20 (GLYCINE-RICH PROTEIN 20)O.I.H.G.S.X.
0.8696.30.92Zm.9182.1.A1_s_atBM267124hypothetical protein LOC100278830-1e+0At2g05803unknown proteinO.I.H.G.S.X.
0.7792.10.91Zm.8882.1.S1_atBG320046--1e+1At1g36732CPuORF19 (Conserved peptide upstream open reading frame 19)O.I.H.G.S.X.
0.7389.90.93Zm.5463.1.A1_atAY104268.1prolyl-tRNA synthetase-4e-80At5g52520OVA6 (OVULE ABORTION 6)O.I.H.G.S.X.
0.6785.80.93Zm.5476.2.S1_atCF016143IQ calmodulin-binding motif family protein-2e-1At1g29060-O.I.H.G.S.X.
0.6785.80.94Zm.17980.1.A1_atCK828030--7e-1At1g19010unknown proteinO.I.H.G.S.X.
0.4048.50.95Zm.2059.1.S1_atAI746127--1e-86At3g58610ketol-acid reductoisomeraseO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.998.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.997.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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