Co-expression analysis

Gene ID Zm.1125.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g51860: MADS-box protein (AGL72) (HF=4e+0)
Module size 13 genes
NF 0.34
%ile 33.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6986.50.91Zm.1125.2.S1_atCF036557--4e+0At5g51860MADS-box protein (AGL72)O.I.H.G.S.X.
0.5267.30.94ZmAffx.781.1.S1_atAI746268--1e+1At4g37450AGP18 (ARABINOGALACTAN PROTEIN 18)O.I.H.G.S.X.
0.5065.70.93Zm.17164.1.S1_atAY188756.1GCK-like kinase MIK-7e-27At3g15220protein kinase, putativeO.I.H.G.S.X.
0.5065.70.95Zm.2179.1.S1_atBF727817--2e+0At5g22520unknown proteinO.I.H.G.S.X.
0.3945.60.95Zm.3111.1.A1_atAY107180.1hypothetical protein LOC100191479-5e-51At5g25100endomembrane protein 70, putativeO.I.H.G.S.X.
0.3945.60.94Zm.13258.1.S1_atAY109432.1CENPCB protein-2e-1At5g20160ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinO.I.H.G.S.X.
0.3641.30.95Zm.5920.1.A1_atAY108960.1hypothetical protein LOC100216713-4e-2At1g28200FIP1 (FH INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.3641.30.95Zm.2517.1.A1_atAF371269.1zein polypeptidesL2b-2e+0At3g03460unknown proteinO.I.H.G.S.X.
0.3131.60.92Zm.18054.1.A1_a_atCK985730hypothetical protein LOC100279833-2e+0At4g15120VQ motif-containing proteinO.I.H.G.S.X.
0.2928.10.94Zm.1032.1.A1_atBE552525polyneuridine-aldehyde esterase-3e-5At1g33990MES14 (METHYL ESTERASE 14)O.I.H.G.S.X.
0.2521.30.93Zm.8672.1.A1_atCF629584hypothetical protein LOC100192472-8e-22At3g03120ATARFB1C (ADP-ribosylation factor B1C)O.I.H.G.S.X.
0.2521.30.93Zm.4177.1.A1_atAY112520.1hypothetical protein LOC100194364-2e-1At4g20380zinc finger protein (LSD1)O.I.H.G.S.X.
0.1912.80.92Zm.11589.1.S1_atBM379169hypothetical protein LOC100280038-8e-7At2g03590ATUPS1 (ARABIDOPSIS THALIANA UREIDE PERMEASE 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.094.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.592.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.592.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.190.8GSM253244ZM_12h_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
2.190.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.190.8GSM290554WS2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO
2.090.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.090.2GSM253245ZM_12h_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
1.989.6GSM253252ZM_24h_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
1.989.6GSM253250ZM_24h_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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