Co-expression analysis

Gene ID Zm.11141.1.S1_at
Gene name hypothetical protein LOC100272903
Homology with ArabidopsisSimilar to At1g64780: ATAMT1 (HF=1e-7)
Module size 6 genes
NF 0.08
%ile 4.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.80.86Zm.11141.1.S1_atAY106810.1hypothetical protein LOC100272903-1e-7At1g64780ATAMT1O.I.H.G.S.X.
0.5065.70.93Zm.1113.1.A1_atBG842198--1e+0At3g54340AP3 (APETALA 3)O.I.H.G.S.X.
0.5065.70.93Zm.1111.1.A1_atCF628636--3e+0At1g02640BXL2 (BETA-XYLOSIDASE 2)O.I.H.G.S.X.
0.5065.70.96Zm.11120.1.A1_atBM337897hypothetical protein LOC100273183-2e-2At3g13850LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22)O.I.H.G.S.X.
0.041.50.90Zm.16174.1.S1_atAY107459.1IDP155 protein-9e-2At1g43970unknown proteinO.I.H.G.S.X.
0.031.10.87Zm.3669.1.A1_atCF635493hypothetical protein LOC100279194-1e-42At5g36880acetyl-CoA synthetase, putative / acetate-CoA ligase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.798.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.294.5GSM205369Mo17 13 DAP endosperm tissue biological replicate 2GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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