Co-expression analysis

Gene ID Zm.1100.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g37475: translation initiation factor-related (HF=4e+0)
Module size 6 genes
NF 0.69
%ile 91.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.86Zm.1100.1.A1_atAY107948.1--4e+0At5g37475translation initiation factor-relatedO.I.H.G.S.X.
0.8395.60.83Zm.227.1.S2_s_atAY109649.1hypothetical protein LOC100279111-2e-12At5g04590SIRO.I.H.G.S.X.
0.6785.80.78Zm.6711.1.A1_atAY104120.1transcription initiation factor IIA gamma chain-4e-29At4g24440transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S)O.I.H.G.S.X.
0.5775.10.84Zm.10223.1.S1_atBM078528elongin C-7e+0At4g19870kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.5065.70.88Zm.15881.1.A1_x_atBM379962--8e-1At5g5671060S ribosomal protein L31 (RPL31C)O.I.H.G.S.X.
0.4861.30.77Zm.8001.1.A1_atCF632719HGA4-3e+0At3g54900CXIP1 (CAX INTERACTING PROTEIN 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.498.8GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
11.998.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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