Co-expression analysis

Gene ID	Zm.10850.1.S1_at
Gene name	ZIM motif family protein
Homology with Arabidopsis	Similar to At5g40420: OLEO2 (OLEOSIN 2) (HF=8e-1)
Module size	6 genes
NF	0.31
%ile	29.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.1	0.97	Zm.10850.1.S1_at	AY106263.1	ZIM motif family protein	-	8e-1	At5g40420	OLEO2 (OLEOSIN 2)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.10850.1.A1_at	AY106263.1	-	-	8e-1	At5g40420	OLEO2 (OLEOSIN 2)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.457.1.S1_at	AF147725.1	ribosomal protein L29	-	2e+0	At2g46330	AGP16 (ARABINOGALACTAN PROTEIN 16)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.97	Zm.11832.1.S1_at	BM381116	hypothetical protein LOC100277564	-	1e-7	At1g57540	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.97	Zm.17643.1.S1_at	CK368600	-	-	2e-1	At5g54850	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	11.6	0.97	Zm.6478.1.S1_at	AI692059	-	-	4e-21	At1g09800	tRNA pseudouridine synthase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.1	98.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.7	98.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.5	98.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4	98.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.1	98.0	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.6	97.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
1.8	88.9	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

A co-expression module including the wheat gene, Ta.30507.1.S1_a_at, orthologous to the query gene, Zm.10850.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.2	Ta.30507.1.S1_a_at	At5g40420	-	-	2e+0	At5g35230	unknown protein	O.I.	H.G.	S.X.	Please select
0.68	86.5	Ta.13803.1.S1_x_at	At5g40420	-	-	3e-2	At1g73630	calcium-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.65	83.9	TaAffx.98004.1.S1_at	At5g40420	-	-	1e+0	At5g28610	-	O.I.	H.G.	S.X.	Please select
0.64	83.6	Ta.7991.3.S1_at	At5g40420	-	-	8e-1	At3g17980	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.64	83.6	Ta.29444.2.S1_a_at	At5g40420	-	-	4e-2	At3g55050	serine/threonine protein phosphatase 2C (PP2C6)	O.I.	H.G.	S.X.	Please select
0.63	83.1	Ta.13803.3.S1_x_at	At5g40420	-	-	2e+0	At2g29920	unknown protein	O.I.	H.G.	S.X.	Please select
0.63	83.1	TaAffx.17013.2.S1_x_at	At5g40420	-	-	1e+0	At4g10250	ATHSP22.0	O.I.	H.G.	S.X.	Please select
0.62	82.3	Ta.24601.1.S1_at	At5g40420	-	-	1e+0	At1g49400	emb1129 (embryo defective 1129)	O.I.	H.G.	S.X.	Please select
0.59	79.8	Ta.4736.1.A1_at	At5g40420	-	-	6e+0	At1g54230	DNA binding	O.I.	H.G.	S.X.	Please select
0.59	79.8	Ta.7568.1.S1_x_at	At5g40420	-	-	4e-1	At5g37780	CAM1 (CALMODULIN 1)	O.I.	H.G.	S.X.	Please select
0.59	79.8	Ta.30507.1.S1_at	At5g40420	-	-	2e+0	At5g35230	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	79.8	Ta.11100.1.S1_at	At5g40420	-	-	3e-2	At5g06660	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	79.8	Ta.7991.3.S1_x_at	At5g40420	-	-	8e-1	At3g17980	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	Ta.29444.2.S1_s_at	At5g40420	-	-	4e-2	At3g55050	serine/threonine protein phosphatase 2C (PP2C6)	O.I.	H.G.	S.X.	Please select
0.55	76.8	Ta.30507.2.S1_x_at	At5g40420	-	-	4e+0	At4g03600	unknown protein	O.I.	H.G.	S.X.	Please select
0.54	75.5	TaAffx.43678.1.S1_x_at	At5g40420	-	-	9e+0	At2g40100	LHCB4.3 (light harvesting complex PSII)	O.I.	H.G.	S.X.	Please select
0.54	75.5	Ta.4674.1.S1_x_at	At5g40420	-	-	2e+0	At4g27140	2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1	O.I.	H.G.	S.X.	Please select
0.53	74.9	TaAffx.48658.1.S1_x_at	At5g40420	-	-	2e+0	At5g17900	-	O.I.	H.G.	S.X.	Please select
0.52	73.7	Ta.9160.2.S1_a_at	At5g40420	-	-	7e-2	At1g10280	unknown protein	O.I.	H.G.	S.X.	Please select
0.48	69.0	Ta.13966.2.S1_s_at	At5g40420	-	-	2e-1	At5g09750	HEC3 (HECATE 3)	O.I.	H.G.	S.X.	Please select
0.47	67.9	Ta.4674.1.S1_s_at	At5g40420	-	-	2e+0	At4g27140	2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1	O.I.	H.G.	S.X.	Please select
0.46	66.8	Ta.16082.2.S1_at	At5g40420	-	-	2e+0	At2g32100	OFP16 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16)	O.I.	H.G.	S.X.	Please select
0.44	64.5	Ta.22757.1.S1_s_at	At5g40420	-	-	1e-4	At1g11700	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	60.9	Ta.7568.3.S1_x_at	At5g40420	-	-	3e-1	At5g37780	CAM1 (CALMODULIN 1)	O.I.	H.G.	S.X.	Please select
0.40	58.4	Ta.4911.1.S1_a_at	At5g40420	-	-	1e+0	At2g15345	enzyme inhibitor/ pectinesterase	O.I.	H.G.	S.X.	Please select
0.29	39.2	Ta.29358.1.A1_at	At5g40420	-	-	2e-6	At3g18040	MPK9 (MAP KINASE 9)	O.I.	H.G.	S.X.	Please select
0.28	39.2	Ta.6752.2.S1_a_at	At5g40420	-	-	3e+0	At4g00270	DNA-binding storekeeper protein-related	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

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