Co-expression analysis

Gene ID Zm.10850.1.S1_at
Gene name ZIM motif family protein
Homology with ArabidopsisSimilar to At5g40420: OLEO2 (OLEOSIN 2) (HF=8e-1)
Module size 6 genes
NF 0.31
%ile 29.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.10.97Zm.10850.1.S1_atAY106263.1ZIM motif family protein-8e-1At5g40420OLEO2 (OLEOSIN 2)O.I.H.G.S.X.
0.5065.70.97Zm.10850.1.A1_atAY106263.1--8e-1At5g40420OLEO2 (OLEOSIN 2)O.I.H.G.S.X.
0.5065.70.97Zm.457.1.S1_atAF147725.1ribosomal protein L29-2e+0At2g46330AGP16 (ARABINOGALACTAN PROTEIN 16)O.I.H.G.S.X.
0.4455.70.97Zm.11832.1.S1_atBM381116hypothetical protein LOC100277564-1e-7At1g57540unknown proteinO.I.H.G.S.X.
0.1912.80.97Zm.17643.1.S1_atCK368600--2e-1At5g54850unknown proteinO.I.H.G.S.X.
0.1811.60.97Zm.6478.1.S1_atAI692059--4e-21At1g09800tRNA pseudouridine synthase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.198.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
1.888.9GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.221239.1.S1_at, orthologous to the query gene, Zm.10850.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5784.2PtpAffx.221239.1.S1_atAt5g40420--4e-135Atmg00660-O.I.H.G.S.X.
0.6791.1PtpAffx.37623.1.A1_atAt5g40420--1e-4Atmg00660-O.I.H.G.S.X.
0.5984.9PtpAffx.80051.1.S1_atAt5g40420--3e+0At4g36510unknown proteinO.I.H.G.S.X.
0.5078.6PtpAffx.18260.1.A1_atAt5g40420--7e+0At3g02870VTC4O.I.H.G.S.X.
0.3762.3Ptp.7070.1.S1_atAt5g40420--5e+0At3g55252-O.I.H.G.S.X.
0.3661.6PtpAffx.221237.1.S1_atAt5g40420--1e-49Atmg01220-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage