Co-expression analysis

Gene ID Zm.1085.2.A1_a_at
Gene name photosystem I reaction center subunit V /// photosystem I reaction center subunit V
Homology with ArabidopsisSimilar to At1g55670: PSAG (PHOTOSYSTEM I SUBUNIT G) (HF=1e-8)
Module size 7 genes
NF 0.40
%ile 45.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.96Zm.1085.2.A1_a_atBQ619399photosystem I reaction center subunit V /// photosystem I reaction center subunit V-1e-8At1g55670PSAG (PHOTOSYSTEM I SUBUNIT G)O.I.H.G.S.X.
0.6785.80.97Zm.16683.1.S1_atAY105333.1--4e-1At3g06610DNA-binding enhancer protein-relatedO.I.H.G.S.X.
0.5065.70.97Zm.3100.1.A1_atCF043630asparaginyl-tRNA synthetase, cytoplasmic 3-2e-27At1g70980SYNC3O.I.H.G.S.X.
0.4251.30.96Zm.10793.1.A1_atCF635868--5e-9At4g04770ATABC1 (ATP BINDING CASSETTE PROTEIN 1)O.I.H.G.S.X.
0.3641.30.96Zm.5225.1.A1_atAI615012hypothetical protein LOC100273591-4e-2At5g48740leucine-rich repeat family protein / protein kinase family proteinO.I.H.G.S.X.
0.3131.60.97Zm.8729.1.A1_atBM339706hypothetical protein LOC100277693-2e-2At3g42310unknown proteinO.I.H.G.S.X.
0.2014.20.97Zm.18352.1.S1_atCO527044glucan endo-1,3-beta-glucosidase, acidic isoform-1e+1At5g62470MYB96 (myb domain protein 96)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.596.3GSM253279ZM_8d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
4.195.9GSM253278ZM_8d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.995.7GSM253265ZM_4d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.795.4GSM253267ZM_4d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.094.0GSM253266ZM_4d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.094.0GSM320445protocol: mRNA - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM253277ZM_8d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
2.993.8GSM253275ZM_8d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
2.893.5GSM320441protocol: mRNA - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.793.2GSM253271ZM_4.5d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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