Co-expression analysis

Gene ID Zm.10827.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g65730: YSL7 (YELLOW STRIPE LIKE 7) (HF=8e-2)
Module size 8 genes
NF 0.53
%ile 69.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.97Zm.10827.1.S1_atBQ619419--8e-2At1g65730YSL7 (YELLOW STRIPE LIKE 7)O.I.H.G.S.X.
0.6077.80.97Zm.3999.1.S1_atCF024332hypothetical protein LOC100276811-3e+0At5g39860PRE1 (PACLOBUTRAZOL RESISTANCE1)O.I.H.G.S.X.
0.6077.80.97Zm.7611.2.A1_atBM268818--2e-3At1g49400emb1129 (embryo defective 1129)O.I.H.G.S.X.
0.5571.60.97Zm.6754.1.A1_atAI396158hypothetical protein LOC100279965-4e-2At4g36530hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.4861.30.97Zm.3767.2.A1_atBM073671--1e-7At5g20890chaperonin, putativeO.I.H.G.S.X.
0.4658.40.97Zm.6644.2.A1_atAY109212.1--4e+0At5g42050-O.I.H.G.S.X.
0.4149.70.97Zm.2716.1.A1_atCD440659--3e+0At4g28700AMT1O.I.H.G.S.X.
0.3844.20.98Zm.15852.2.A1_atAY108720.1--1e-41At5g03430phosphoadenosine phosphosulfate (PAPS) reductase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.598.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320443protocol: mRNA - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.56362.1.A1_at, orthologous to the query gene, Zm.10827.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8897.7PtpAffx.56362.1.A1_atAt1g65730--3e+0At5g63905unknown proteinO.I.H.G.S.X.
0.9499.6PtpAffx.222219.1.S1_atAt1g65730--5e-3At3g22020-O.I.H.G.S.X.
0.9499.6PtpAffx.126213.1.S1_s_atAt1g65730--5e+0At5g56120unknown proteinO.I.H.G.S.X.
0.9399.5PtpAffx.2386.3.S1_atAt1g65730hypothetical protein-2e+0At4g03150unknown proteinO.I.H.G.S.X.
0.8797.5PtpAffx.127432.1.A1_atAt1g65730hypothetical protein-4e-4At1g68725AGP19 (ARABINOGALACTAN-PROTEIN 19)O.I.H.G.S.X.
0.8497.1PtpAffx.128798.1.S1_atAt1g65730hypothetical protein-2e-15At5g41080glycerophosphoryl diester phosphodiesterase family proteinO.I.H.G.S.X.
0.8397.0PtpAffx.24159.1.A1_atAt1g65730hypothetical protein-9e-3At1g70410carbonic anhydrase, putative / carbonate dehydratase, putativeO.I.H.G.S.X.
0.8397.0PtpAffx.210801.1.S1_x_atAt1g65730hypothetical protein-4e+0At5g05770WOX7 (WUSCHEL-RELATED HOMEOBOX 7)O.I.H.G.S.X.
0.8397.0PtpAffx.24159.1.A1_x_atAt1g65730hypothetical protein-9e-3At1g70410carbonic anhydrase, putative / carbonate dehydratase, putativeO.I.H.G.S.X.
0.8196.1PtpAffx.18976.1.A1_atAt1g65730hypothetical protein-1e+1At5g20160ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinO.I.H.G.S.X.
0.7995.3PtpAffx.6273.1.S1_atAt1g65730--1e+1At5g05910zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.7995.3PtpAffx.210801.1.S1_atAt1g65730hypothetical protein-4e+0At5g05770WOX7 (WUSCHEL-RELATED HOMEOBOX 7)O.I.H.G.S.X.
0.7895.1PtpAffx.697.4.S1_a_atAt1g65730polyphenol oxidase-3e-1At3g62820invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.7694.3PtpAffx.114045.1.A1_atAt1g65730hypothetical protein-1e+0At5g13570DCP2 (DECAPPING 2)O.I.H.G.S.X.
0.7493.8PtpAffx.222005.1.S1_s_atAt1g65730hypothetical protein-1e+0At2g04425LCR82 (Low-molecular-weight cysteine-rich 82)O.I.H.G.S.X.
0.5884.2PtpAffx.25648.2.A1_atAt1g65730hypothetical protein-6e-14At4g02280SUS3 (sucrose synthase 3)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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