| Gene ID | Zm.10818.1.S1_at |
| Gene name | hypothetical protein LOC100273163 |
| Homology with Arabidopsis | Similar to At4g02610: tryptophan synthase, alpha subunit, putative (HF=1e-4) |
| Module size | 6 genes |
| NF | 0.05 |
| %ile | 2.5 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.0 | 0.93 | Zm.10818.1.S1_at | CF650494 | hypothetical protein LOC100273163 | - | 1e-4 | At4g02610 | tryptophan synthase, alpha subunit, putative | O.I. | H.G. | S.X. | |
| 0.31 | 31.6 | 0.97 | Zm.13026.1.S1_at | AY111398.1 | - | - | 3e-1 | At4g28930 | unknown protein | O.I. | H.G. | S.X. | |
| 0.09 | 4.0 | 0.96 | Zm.9039.1.A1_at | BM078424 | hypothetical protein LOC100193374 | - | 5e-1 | At1g55310 | SR33 | O.I. | H.G. | S.X. | |
| 0.06 | 2.3 | 0.96 | Zm.5358.1.A1_at | CF003205 | ras-related protein Rab11D | - | 9e-1 | At2g01250 | 60S ribosomal protein L7 (RPL7B) | O.I. | H.G. | S.X. | |
| 0.06 | 2.3 | 0.95 | Zm.8194.1.A1_at | BM380105 | hypothetical protein LOC100274820 /// hypothetical protein LOC100276986 | - | 7e+0 | At5g04750 | F1F0-ATPase inhibitor protein, putative | O.I. | H.G. | S.X. | |
| 0.01 | 0.3 | 0.96 | Zm.9846.1.A1_at | BM340911 | - | - | 8e-2 | At1g04445 | zinc finger (C2H2 type) family protein | O.I. | H.G. | S.X. |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB | 0.33 | 36.0 | 0.95 | Zm.4055.1.A1_at | AI834130 | auxin transporter-like protein 3 | - | 1e-10 | At2g21050 | amino acid permease, putative | O.I. | H.G. | S.X. | 0.22 | 16.9 | 0.97 | Zm.5319.1.S1_a_at | AY103567.1 | lipoxygenase | - | 4e-7 | At3g22400 | LOX5 | O.I. | H.G. | S.X. | 0.21 | 15.5 | 0.93 | Zm.14308.1.A1_at | AI979735 | adenine phosphoribosyltransferase 1 | - | 7e-13 | At1g27450 | APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1) | O.I. | H.G. | S.X. | 0.19 | 12.8 | 0.95 | Zm.15824.2.A1_s_at | CF628533 | hypothetical protein LOC100191463 | - | 4e-20 | At3g03250 | UGP (UDP-glucose pyrophosphorylase) | O.I. | H.G. | S.X. | 0.19 | 12.8 | 0.95 | Zm.16923.3.A1_at | BQ619322 | chlorophyll a-b binding protein 2 | - | 2e-50 | At2g34430 | LHB1B1 | O.I. | H.G. | S.X. | 0.18 | 11.6 | 0.96 | Zm.18230.1.S1_at | CN844227 | hypothetical protein LOC100278474 | - | 2e+0 | At4g18510 | CLE2 (CLAVATA3/ESR-RELATED) | O.I. | H.G. | S.X. | 0.17 | 10.6 | 0.95 | Zm.1409.2.S1_at | BQ486262 | pectinesterase inhibitor domain containing protein | - | 2e+0 | At3g28455 | CLE25 (CLAVATA3/ESR-RELATED 25) | O.I. | H.G. | S.X. | 0.15 | 8.6 | 0.97 | Zm.5878.1.A1_at | BU572163 | hypothetical protein LOC100191954 | - | 6e-9 | At1g76900 | AtTLP1 (TUBBY LIKE PROTEIN 1) | O.I. | H.G. | S.X. | 0.15 | 8.6 | 0.93 | Zm.4330.1.S1_at | CO525305 | mitochondrial import inner membrane translocase subunit TIM14 | - | 2e-24 | At3g09700 | DNAJ heat shock N-terminal domain-containing protein | O.I. | H.G. | S.X. | 0.14 | 7.7 | 0.93 | Zm.122.1.S1_at | AY105634.1 | malate dehydrogenase6 | - | 9e-13 | At5g58330 | malate dehydrogenase (NADP), chloroplast, putative | O.I. | H.G. | S.X. |
|---|
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 10.8 | 98.5 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.4 | 98.4 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.9 | 98.3 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.3 | 98.0 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.0 | 98.0 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.8 | 97.9 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.7 | 97.9 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.6 | 97.9 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.5 | 97.8 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.2 | 97.8 | GSM253280 | ZM_8d_SG200_3Alu_I | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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