Co-expression analysis

Gene ID Zm.10818.1.S1_at
Gene name hypothetical protein LOC100273163
Homology with ArabidopsisSimilar to At4g02610: tryptophan synthase, alpha subunit, putative (HF=1e-4)
Module size 6 genes
NF 0.05
%ile 2.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.93Zm.10818.1.S1_atCF650494hypothetical protein LOC100273163-1e-4At4g02610tryptophan synthase, alpha subunit, putativeO.I.H.G.S.X.
0.3131.60.97Zm.13026.1.S1_atAY111398.1--3e-1At4g28930unknown proteinO.I.H.G.S.X.
0.094.00.96Zm.9039.1.A1_atBM078424hypothetical protein LOC100193374-5e-1At1g55310SR33O.I.H.G.S.X.
0.062.30.96Zm.5358.1.A1_atCF003205ras-related protein Rab11D-9e-1At2g0125060S ribosomal protein L7 (RPL7B)O.I.H.G.S.X.
0.062.30.95Zm.8194.1.A1_atBM380105hypothetical protein LOC100274820 /// hypothetical protein LOC100276986-7e+0At5g04750F1F0-ATPase inhibitor protein, putativeO.I.H.G.S.X.
0.010.30.96Zm.9846.1.A1_atBM340911--8e-2At1g04445zinc finger (C2H2 type) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.898.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os03g0797400, orthologous to the query gene, Zm.10818.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9599.6Os03g0797400At4g02610-Tryptophan synthase, alpha chain domain containingprotein4e-2At5g66090unknown proteinO.I.H.G.S.X.
0.2625.6Os05g0582800At4g02610-Peptidase S10, serine carboxypeptidase familyprotein3e+0At1g15000scpl50 (serine carboxypeptidase-like 50)O.I.H.G.S.X.
0.2422.4Os03g0736900At4g02610-Conserved hypothetical protein2e+0At5g23100unknown proteinO.I.H.G.S.X.
0.1611.3Os01g0655500At4g02610-Protein kinase domain containing protein1e-10At5g53450ORG1 (OBP3-responsive gene 1)O.I.H.G.S.X.
0.149.3Os02g0634700At4g02610-Serine carboxypeptidase II-1 precursor (EC3.4.16.6) (CP-MII.1) (Fragment)3e-16At5g23210SCPL34O.I.H.G.S.X.
0.138.2Os09g0401300At4g02610-ZIM domain containing protein4e-3At1g70700TIFY7O.I.H.G.S.X.
0.138.2Os08g0105800At4g02610-E-class P450, group I family protein7e-5At3g44250CYP71B38O.I.H.G.S.X.
0.127.2Os01g0851100At4g02610-Axi 1 (Auxin-independent growth promoter)-likeprotein3e-14At3g54100unknown proteinO.I.H.G.S.X.
0.094.9Os01g0749400At4g02610-Glycosyl transferase, family 20 domain containingprotein2e-12At1g06410ATTPS7O.I.H.G.S.X.
0.094.9Os01g0338600At4g02610-Conserved hypothetical protein6e-29At2g43945unknown proteinO.I.H.G.S.X.
0.084.2Os04g0585200At4g02610-Glutamate receptor 3.3 precursor (Ligand-gated ionchannel 3.3)4e-7At4g35290GLUR2 (GLUTAMATE RECEPTOR 2)O.I.H.G.S.X.
0.084.2Os02g0668100At4g02610-Polyprenyl synthetase family protein2e-1At4g18620-O.I.H.G.S.X.
0.073.7Os04g0623300At4g02610-Flavin-containing amine oxidase family protein2e-18At2g43020ATPAO2 (Polyamine oxidase 2)O.I.H.G.S.X.
0.073.7Os01g0629400At4g02610-NLI interacting factor domain containing protein5e-3At5g11860NLI interacting factor (NIF) family proteinO.I.H.G.S.X.
0.042.0Os01g0495900At4g02610-Protein of unknown function UPF0044 family protein2e-8At2g20020CAF1O.I.H.G.S.X.
0.042.0Os04g0456700At4g02610-Lipoxygenase, LH2 domain containing protein3e-2At1g72210basic helix-loop-helix (bHLH) family protein (bHLH096)O.I.H.G.S.X.
0.042.0Os04g0558400At4g02610-Acyl-CoA thioesterase family protein6e-5At4g00520-O.I.H.G.S.X.
0.031.4Os01g0123900At4g02610-Bowman-Birk type proteinase inhibitor (EBI)2e-3At4g30662unknown proteinO.I.H.G.S.X.
0.031.4Os02g0630300At4g02610-2OG-Fe(II) oxygenase domain containing protein4e-3At1g066502-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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