Co-expression analysis

Gene ID Zm.10798.1.A1_at
Gene name Hypothetical protein LOC100191405
Homology with ArabidopsisSimilar to At1g26930: kelch repeat-containing F-box family protein (HF=1e-2)
Module size 6 genes
NF 0.53
%ile 68.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.94Zm.10798.1.A1_atCF003582Hypothetical protein LOC100191405-1e-2At1g26930kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.7389.90.93Zm.1866.1.A1_atAW498013--5e-7At4g11270transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.5369.10.94Zm.4541.1.S1_atAY104176.1hypothetical protein LOC100274427-5e-8At5g67400peroxidase 73 (PER73) (P73) (PRXR11)O.I.H.G.S.X.
0.5065.70.94ZmAffx.706.1.A1_atAI738209--8e-1At1g23590unknown proteinO.I.H.G.S.X.
0.3641.30.94Zm.10799.1.S1_atAY108939.1hypothetical protein LOC100192060-3e+0At5g20110dynein light chain, putativeO.I.H.G.S.X.
0.2928.10.94Zm.13434.1.A1_atAW562937hypothetical protein LOC100192499-4e-12At5g56090COX15 (cytochrome c oxidase 15)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.999.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.298.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.198.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.793.2GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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