Co-expression analysis

Gene ID Zm.10773.1.A1_at
Gene name hypothetical protein LOC100191227
Homology with ArabidopsisSimilar to At1g73010: phosphatase (HF=1e+0)
Module size 6 genes
NF 0.32
%ile 30.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4861.30.88Zm.10773.1.A1_atAY105086.1hypothetical protein LOC100191227-1e+0At1g73010phosphataseO.I.H.G.S.X.
0.9199.00.90Zm.13485.1.S1_atAY108893.1--3e-1At5g16540ZFN3 (ZINC FINGER NUCLEASE 3)O.I.H.G.S.X.
0.3641.30.89Zm.11731.1.A1_atBM380291helix-loop-helix DNA-binding domain containing protein-5e-9At4g09180basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.2115.50.89Zm.14827.1.S1_atAJ430635.1m21 protein-1e-1At1g28200FIP1 (FH INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.2014.20.90Zm.17767.1.A1_atCK371577hypothetical protein LOC100191424-4e-1At2g14365LCR84 (Low-molecular-weight cysteine-rich 84)O.I.H.G.S.X.
0.169.40.88Zm.13661.1.A1_atAY107142.1--2e+0At4g25710kelch repeat-containing F-box family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.798.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.498.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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