Co-expression analysis

Gene ID	Zm.10769.1.A1_at
Gene name	glutamate carboxypeptidase 2
Homology with Arabidopsis	Similar to At2g18890: protein kinase family protein (HF=2e+0)
Module size	8 genes
NF	0.65
%ile	87.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.2	0.89	Zm.10769.1.A1_at	CF624289	glutamate carboxypeptidase 2	-	2e+0	At2g18890	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.77	92.1	0.91	Zm.2603.1.A1_at	AY105900.1	-	-	5e-2	At4g23430	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.92	Zm.17354.1.S1_at	CK370561	-	-	4e+0	At3g23360	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.94	Zm.3770.1.S1_a_at	AW225042	hypothetical protein LOC100278844	-	1e-43	At5g07290	AML4 (ARABIDOPSIS MEI2-LIKE 4)	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.88	Zm.5048.7.A1_x_at	AI622162	-	-	3e-11	At5g07090	40S ribosomal protein S4 (RPS4B)	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.93	Zm.11834.1.S1_at	BM381120	hypothetical protein LOC100191186	-	4e-1	At1g06475	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.93	Zm.1711.1.A1_at	CO534032	clathrin assembly protein	-	3e-1	At2g34800	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.91	Zm.11968.1.A1_at	BM382246	hypothetical protein LOC100216643	-	3e+0	At4g12240	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.7	99.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.5	99.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.2	98.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.4	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.7	98.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.5	98.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.6	92.9	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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