Co-expression analysis

Gene ID	Zm.107.1.S1_at
Gene name	glutamine synthetase2
Homology with Arabidopsis	Similar to At3g17820: ATGSKB6 (HF=2e-17)
Module size	7 genes
NF	0.21
%ile	16.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	77.8	0.94	Zm.107.1.S1_at	AY104270.1	glutamine synthetase2	-	2e-17	At3g17820	ATGSKB6	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.96	Zm.14508.1.S1_at	BM349650	-	-	2e-7	At1g22620	ATSAC1 (suppressor of actin 1)	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.95	Zm.5193.1.A1_at	AI612356	chitin-inducible gibberellin-responsive protein 2	-	1e+0	At5g51210	OLEO3 (OLEOSIN3)	O.I.	H.G.	S.X.	Please select
0.16	9.4	0.96	Zm.5172.1.A1_at	BM266341	-	-	1e-1	At1g79960	OFP14 (OVATE FAMILY PROTEIN 14)	O.I.	H.G.	S.X.	Please select
0.14	7.7	0.95	Zm.18403.1.A1_at	BM072852	hypothetical protein LOC100274307	-	5e-3	At5g38120	4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein	O.I.	H.G.	S.X.	Please select
0.12	5.9	0.95	ZmAffx.7.1.S1_at	AY683004.1	monosaccharide transport protein 1	-	4e-9	At1g50310	STP9 (SUGAR TRANSPORTER 9)	O.I.	H.G.	S.X.	Please select
0.10	4.6	0.95	Zm.8478.2.A1_x_at	BM381399	hypothetical protein LOC100275408	-	1e+0	At3g27890	NQR (NADPH:QUINONE OXIDOREDUCTASE)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.2	98.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM162266	Wild type 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
9.6	98.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.4	98.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4	98.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.4	97.8	GSM162265	Wild type 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
6.8	97.6	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
6.2	97.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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