| Gene ID | Zm.10665.1.A1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At5g03455: CDC25 (HF=1e+1) |
| Module size | 6 genes |
| NF | 0.22 |
| %ile | 16.9 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.73 | 89.9 | 0.96 | Zm.10665.1.A1_at | BQ538910 | - | - | 1e+1 | At5g03455 | CDC25 | O.I. | H.G. | S.X. | |
| 0.31 | 31.6 | 0.97 | Zm.484.1.A1_at | AF136827.1 | elongation factor 1 alpha | - | 0 | At1g07920 | elongation factor 1-alpha / EF-1-alpha | O.I. | H.G. | S.X. | |
| 0.26 | 22.7 | 0.97 | ZmAffx.122.1.A1_at | AI665696 | hypothetical protein LOC100217096 | - | 8e-1 | At1g23260 | MMZ1 (MMS ZWEI HOMOLOGUE 1) | O.I. | H.G. | S.X. | |
| 0.25 | 21.3 | 0.97 | Zm.15215.1.A1_at | BM332652 | Hypothetical protein LOC100193843 | - | 1e+0 | At5g22870 | harpin-induced protein-related / HIN1-related / harpin-responsive protein-related | O.I. | H.G. | S.X. | |
| 0.17 | 10.6 | 0.97 | Zm.2236.1.S1_at | BQ538247 | peroxiredoxin bcp | - | 9e-9 | At3g26060 | ATPRX Q | O.I. | H.G. | S.X. | |
| 0.09 | 4.0 | 0.97 | Zm.326.1.S1_at | AB042269.1 | response regulator 7 | - | 3e+0 | At5g41761 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 14.8 | 98.9 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 14.2 | 98.8 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.5 | 98.4 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.8 | 98.1 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.2 | 98.0 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.1 | 98.0 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.0 | 98.0 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.6 | 97.9 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.2 | 97.4 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.5 | 96.3 | GSM320456 | protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.95 | 99.6 | Os02g0763000 | At5g03455 | - | Uncharacterized Cys-rich domain containing protein | 2e+0 | At1g68630 | unknown protein | O.I. | H.G. | S.X. | |
| 0.47 | 62.3 | Os01g0801600 | At5g03455 | - | NAD-dependent glycerol-3-phosphate dehydrogenasefamily protein | 2e-32 | At2g41540 | GPDHC1 | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | Os03g0307400 | At5g03455 | - | Quinoprotein amine dehydrogenase, beta chain-likedomain containing protein | 8e-1 | At4g27810 | unknown protein | O.I. | H.G. | S.X. | |
| 0.22 | 19.4 | Os09g0508300 | At5g03455 | - | Zn-finger, DHHC type domain containing protein | 8e-14 | At5g50020 | zinc finger (DHHC type) family protein | O.I. | H.G. | S.X. | |
| 0.13 | 8.2 | Os03g0266100 | At5g03455 | - | Zn-binding protein, LIM domain containing protein | 9e-12 | At3g55770 | LIM domain-containing protein | O.I. | H.G. | S.X. | |
| 0.07 | 3.7 | Os04g0687100 | At5g03455 | - | Soluble inorganic pyrophosphatase (EC 3.6.1.1)(Pyrophosphate phospho- hydrolase) (PPase) | 1e-29 | At4g01480 | AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5) | O.I. | H.G. | S.X. | |
| 0.07 | 3.7 | Os01g0714900 | At5g03455 | - | RAB7A | 7e-22 | At4g09720 | Ras-related GTP-binding protein, putative | O.I. | H.G. | S.X. | |
| 0.04 | 2.0 | Os11g0162200 | At5g03455 | - | - | 3e-7 | At1g15120 | ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative | O.I. | H.G. | S.X. | |
| 0.04 | 2.0 | Os06g0665000 | At5g03455 | - | Eukaryotic protein of unknown function DUF284family protein | 4e-6 | At1g79450 | ALIS5 (ALA-Interacting Subunit 5) | O.I. | H.G. | S.X. | |
| 0.01 | 0.5 | Os03g0118400 | At5g03455 | - | Cell division control protein 2 homolog 1 (EC2.7.1.37) | 4e-5 | At3g48750 | CDC2 (CELL DIVISION CONTROL 2) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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