Co-expression analysis

Gene ID Zm.10665.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g03455: CDC25 (HF=1e+1)
Module size 6 genes
NF 0.22
%ile 16.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.96Zm.10665.1.A1_atBQ538910--1e+1At5g03455CDC25O.I.H.G.S.X.
0.3131.60.97Zm.484.1.A1_atAF136827.1elongation factor 1 alpha-0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.2622.70.97ZmAffx.122.1.A1_atAI665696hypothetical protein LOC100217096-8e-1At1g23260MMZ1 (MMS ZWEI HOMOLOGUE 1)O.I.H.G.S.X.
0.2521.30.97Zm.15215.1.A1_atBM332652Hypothetical protein LOC100193843-1e+0At5g22870harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedO.I.H.G.S.X.
0.1710.60.97Zm.2236.1.S1_atBQ538247peroxiredoxin bcp-9e-9At3g26060ATPRX QO.I.H.G.S.X.
0.094.00.97Zm.326.1.S1_atAB042269.1response regulator 7-3e+0At5g41761unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.898.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.298.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig15862_s_at, orthologous to the query gene, Zm.10665.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.1Contig15862_s_atAt5g03455--7e-1At1g69580transcription factorO.I.H.G.S.X.
0.6784.7Contig12224_atAt5g03455--4e-8At1g22200unknown proteinO.I.H.G.S.X.
0.6380.3Contig14054_atAt5g03455--8e+0At1g61700DNA-directed RNA polymerase II, putative (RPB10)O.I.H.G.S.X.
0.5369.7Contig13404_atAt5g03455--2e+0At1g76750unknown proteinO.I.H.G.S.X.
0.5066.9Contig13403_atAt5g03455--9e-31At5g36950DegP10 (DegP protease 10)O.I.H.G.S.X.
0.1514.1HVSMEm0018N06r2_atAt5g03455--4e+0At5g50000protein kinase, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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