Co-expression analysis

Gene ID	Zm.106.1.A1_at
Gene name	glycine-rich protein3
Homology with Arabidopsis	Similar to At3g06130: heavy-metal-associated domain-containing protein (HF=4e-2)
Module size	6 genes
NF	0.16
%ile	11.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.9	0.99	Zm.106.1.A1_at	Y07781.1	glycine-rich protein3	-	4e-2	At3g06130	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.99	Zm.14408.1.A1_a_at	BM336357	hypothetical protein LOC100191818 /// ubiquitin-conjugating enzyme E2 16	-	1e-44	At5g25760	PEX4 (PEROXIN4)	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.99	ZmAffx.1187.1.S1_at	BE012211	-	-	3e+0	At4g29033	-	O.I.	H.G.	S.X.	Please select
0.12	5.9	0.99	Zm.13635.1.A1_at	AY107316.1	growth regulator like protein	-	4e+0	At3g52070	unknown protein	O.I.	H.G.	S.X.	Please select
0.11	5.3	0.99	Zm.3034.1.A1_at	AW134469	ZCN15 protein	-	2e-2	At2g27550	ATC (ARABIDOPSIS THALIANA CENTRORADIALIS)	O.I.	H.G.	S.X.	Please select
0.09	4.0	0.99	Zm.11630.1.A1_at	BM379429	-	-	4e+0	At4g13570	HTA4	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.4	97.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5	97.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM253263	ZM_4d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
5.8	97.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.3	96.9	GSM253262	ZM_4d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
5.3	96.9	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
4.9	96.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.7	96.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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