Co-expression analysis

Gene ID	Zm.10516.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g03840: TFL1 (TERMINAL FLOWER 1) (HF=5e+0)
Module size	6 genes
NF	0.43
%ile	51.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	58.4	0.92	Zm.10516.1.S1_at	CF009232	-	-	5e+0	At5g03840	TFL1 (TERMINAL FLOWER 1)	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.93	Zm.1866.1.A1_at	AW498013	-	-	5e-7	At4g11270	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.93	Zm.4541.1.S1_at	AY104176.1	hypothetical protein LOC100274427	-	5e-8	At5g67400	peroxidase 73 (PER73) (P73) (PRXR11)	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.94	Zm.10798.1.A1_at	CF003582	Hypothetical protein LOC100191405	-	1e-2	At1g26930	kelch repeat-containing F-box family protein	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.94	Zm.10799.1.S1_at	AY108939.1	hypothetical protein LOC100192060	-	3e+0	At5g20110	dynein light chain, putative	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.93	Zm.747.1.A1_at	CF627612	hypothetical protein LOC100191588	-	3e-22	At1g16180	TMS membrane family protein / tumour differentially expressed (TDE) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
17.8	99.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.4	99.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.2	99.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.0	99.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.9	99.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.6	99.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.2	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.3	98.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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