Co-expression analysis

Gene ID Zm.10513.1.S1_at
Gene name hypothetical protein LOC100277818
Homology with ArabidopsisSimilar to At5g46730: glycine-rich protein (HF=1e-1)
Module size 11 genes
NF 0.44
%ile 52.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5775.10.96Zm.10513.1.S1_atAY105530.1hypothetical protein LOC100277818-1e-1At5g46730glycine-rich proteinO.I.H.G.S.X.
0.6381.10.98Zm.5310.1.A1_atAI619202hypothetical protein LOC100275354-4e+0At3g15820phosphatidic acid phosphatase-related / PAP2-relatedO.I.H.G.S.X.
0.6077.80.98Zm.9371.1.A1_x_atBM350310hypothetical protein LOC100275410-1e+0At1g53160SPL4 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4)O.I.H.G.S.X.
0.5369.10.97Zm.10246.1.S1_atAW017498--3e-1At4g00270DNA-binding storekeeper protein-relatedO.I.H.G.S.X.
0.5065.70.97Zm.9529.1.A1_atCA399003hypothetical protein LOC100191488-3e-35At1g20380prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putativeO.I.H.G.S.X.
0.5065.70.98ZmAffx.718.1.A1_s_atAI739895hypothetical protein LOC100191952-3e+0At3g50780-O.I.H.G.S.X.
0.4352.80.98ZmAffx.1129.1.A1_atAW330590--2e+0At1g68870unknown proteinO.I.H.G.S.X.
0.4251.30.97Zm.11599.1.A1_atBM379225--5e+0At5g59990-O.I.H.G.S.X.
0.3844.20.98ZmAffx.391.1.A1_atAI676819--1e-2At2g25685SCRL17 (SCR-Like 17)O.I.H.G.S.X.
0.3131.60.97Zm.3407.1.S1_atBM080146SC3 protein-3e-6At1g32050secretory carrier membrane protein (SCAMP) family proteinO.I.H.G.S.X.
0.2521.30.97Zm.1541.1.A1_a_atBI991831hypothetical protein LOC100273004-2e+0At1g71840transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
31.099.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
27.199.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
24.099.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
21.399.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
21.199.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.999.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.499.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.899.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.499.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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