Co-expression analysis

Gene ID Zm.10479.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g13990: ATEXO70C2 (exocyst subunit EXO70 family protein C2) (HF=5e+0)
Module size 6 genes
NF 0.55
%ile 71.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.20.97Zm.10479.1.S1_atBQ486450--5e+0At5g13990ATEXO70C2 (exocyst subunit EXO70 family protein C2)O.I.H.G.S.X.
0.6381.10.97Zm.7620.1.A1_atCF629426hypothetical protein LOC100279978-2e-3At2g24010scpl23 (serine carboxypeptidase-like 23)O.I.H.G.S.X.
0.5571.60.97Zm.1158.1.A1_atAY107067.1--4e-31At5g10270CDKCO.I.H.G.S.X.
0.5369.10.97Zm.6293.1.A1_atCF038760hypothetical protein LOC100216905-4e+0At5g08400unknown proteinO.I.H.G.S.X.
0.4658.40.97Zm.2810.1.S1_atCK371548calcitonin peptide-receptor component protein-7e-1At1g18170immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.H.G.S.X.
0.2928.10.98Zm.7941.1.A1_atBM080529--1e+0At3g50040unknown proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6077.80.97Zm.5095.1.S1_s_atBM269118hypothetical protein LOC100192930-2e+0At4g16447unknown proteinO.I.H.G.S.X.
0.5674.40.97Zm.463.1.A1_atU95953.1viviparous14-5e-6At3g14440NCED3 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3)O.I.H.G.S.X.
0.5065.70.97Zm.18496.1.S1_atCO519895hypothetical protein LOC100217235-2e-1At5g05100nucleic acid bindingO.I.H.G.S.X.
0.4658.40.97Zm.12031.1.A1_atBM382777--2e+1At5g05650-O.I.H.G.S.X.
0.4048.50.96Zm.6357.2.A1_atAI691958hypothetical protein LOC100194201-1e-7At3g15680zinc finger (Ran-binding) family proteinO.I.H.G.S.X.
0.4048.50.97Zm.2708.1.S1_atCA398368--8e-8At2g26510PDE135 (pigment defective embryo 135)O.I.H.G.S.X.
0.4048.50.97Zm.3263.1.A1_atBG842806nudix hydrolase 13-2e+0At3g52525OFP6 (OVATE FAMILY PROTEIN 6)O.I.H.G.S.X.
0.4048.50.97ZmAffx.966.1.S1_atAI677247--8e-1At5g47830unknown proteinO.I.H.G.S.X.
0.3945.60.97Zm.12059.1.A1_atCF244848hypothetical protein LOC100273055-4e+0At5g45680FK506-binding protein 1 (FKBP13)O.I.H.G.S.X.
0.3844.20.97Zm.9201.1.A1_atBM340120hypothetical protein LOC100272902-6e+0At5g62540UBC3 (ubiquitin-conjugating enzyme 3)O.I.H.G.S.X.
0.3742.30.96Zm.5251.1.A1_atCD982303hypothetical protein LOC100273610-3e-15At4g20980eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putativeO.I.H.G.S.X.
0.3641.30.97Zm.18066.1.A1_atAI738164hypothetical protein LOC100272811-3e-2At2g16860GCIP-interacting family proteinO.I.H.G.S.X.
0.3641.30.98Zm.218.1.A1_a_atAB016802.1ABA stimulation MAP kinase-6e-42At2g43790ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)O.I.H.G.S.X.
0.3538.90.97Zm.4137.1.S1_atAI855128--2e+0At4g21330DYT1 (DYSFUNCTIONAL TAPETUM 1)O.I.H.G.S.X.
0.3538.90.97Zm.4980.1.A1_atCF626828hypothetical protein LOC100276552-3e-2At3g149904-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putativeO.I.H.G.S.X.
0.3336.00.94Zm.3748.1.S1_atCF624336--4e-23At5g11110ATSPS2F (SUCROSE PHOSPHATE SYNTHASE 2F)O.I.H.G.S.X.
0.3336.00.96Zm.15732.1.A1_a_atAY104940.1hypothetical protein LOC100280046-6e-9At3g06980DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.3336.00.96Zm.12940.2.A1_atAI770813--8e-1At4g15050unknown proteinO.I.H.G.S.X.
0.3336.00.96Zm.8654.1.A1_atBM334074hypothetical protein LOC100280034-3e-2At2g30490C4H (CINNAMATE-4-HYDROXYLASE)O.I.H.G.S.X.
0.3336.00.96Zm.5279.1.S1_atAY106402.1--8e+0At5g64310AGP1 (ARABINOGALACTAN PROTEIN 1)O.I.H.G.S.X.
0.3336.00.96Zm.17292.1.S1_atCK368812hypothetical protein LOC100272452-6e-1At1g25155anthranilate synthase beta subunit, putativeO.I.H.G.S.X.
0.3336.00.96Zm.11938.1.A1_atBM381992hypothetical protein LOC100278050-4e+0At5g65165SDH2-3O.I.H.G.S.X.
0.3336.00.97Zm.2541.1.A1_atCF629797cortical cell-delineating protein-2e+0At1g12090ELP (EXTENSIN-LIKE PROTEIN)O.I.H.G.S.X.
0.3336.00.97Zm.15705.1.A1_atCD440189--1e-4At4g38270GAUT3 (Galacturonosyltransferase 3)O.I.H.G.S.X.
0.3336.00.97Zm.18795.1.S1_atCO526138hypothetical protein LOC100273526-2e-8At5g11350endonuclease/exonuclease/phosphatase family proteinO.I.H.G.S.X.
0.3336.00.97Zm.851.1.S1_atCF007204hypothetical protein LOC100275940-3e-8At1g10590DNA-binding protein-relatedO.I.H.G.S.X.
0.3336.00.98Zm.2016.1.S1_atAW566149zinc finger, C3HC4 type family protein-2e+0At5g51195unknown proteinO.I.H.G.S.X.
0.3336.00.98Zm.10534.1.A1_x_atCO049306receptor protein kinase CLAVATA1-2e+0At2g36890RAX2 (REGULATOR OF AXILLARY MERISTEMS 2)O.I.H.G.S.X.
0.3233.40.96Zm.7960.1.A1_atCF637637transparent testa 12 protein-5e-1At4g21910MATE efflux family proteinO.I.H.G.S.X.
0.3131.60.96Zm.6153.1.S1_atAI676869hypothetical protein LOC100191485-8e+0At5g11412nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.3131.60.95ZmAffx.473.1.S1_atAI677499Starch synthase IIIb-2 precursor-3e+0At3g12145FLR1O.I.H.G.S.X.
0.3131.60.96Zm.19112.1.A1_atCO517957--3e-4At2g40890CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)O.I.H.G.S.X.
0.3131.60.96Zm.6303.1.S1_atAF064707.1--8e-27At5g20950glycosyl hydrolase family 3 proteinO.I.H.G.S.X.
0.3131.60.97Zm.292.1.S1_atL46397.1MADS box protein-2e-7At3g61120AGL13 (AGAMOUS-LIKE 13)O.I.H.G.S.X.
0.3029.80.97Zm.2660.1.A1_atAW066755hypothetical protein LOC100194122-3e-1At3g19180ARC6HO.I.H.G.S.X.
0.3029.80.96Zm.218.1.A1_atAB016802.1MAP kinase 5-2e-50At2g43790ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)O.I.H.G.S.X.
0.3029.80.97Zm.6649.1.S1_atCK370002hypothetical protein LOC100191356-8e-4At3g05290PNC1 (PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1)O.I.H.G.S.X.
0.3029.80.97Zm.2749.1.A1_atAW067078--8e-5At3g18080BGLU44 (B-S GLUCOSIDASE 44)O.I.H.G.S.X.
0.2928.10.96Zm.1199.1.S1_atCD996242hypothetical protein LOC100280192-8e+0At4g27320universal stress protein (USP) family proteinO.I.H.G.S.X.
0.2928.10.96Zm.11640.1.A1_atBM379555--4e+0At2g32650-O.I.H.G.S.X.
0.2928.10.97Zm.2499.1.A1_atBM381924NFU3-2e+0At5g49940NFU2 (NIFU-LIKE PROTEIN 2)O.I.H.G.S.X.
0.2828.10.97Zm.13749.1.S1_atAY105979.1--7e-1At5g22650HD2B (HISTONE DEACETYLASE 2B)O.I.H.G.S.X.
0.2724.60.97Zm.9814.1.A1_atBM351590--4e+0At5g26840unknown proteinO.I.H.G.S.X.
0.2724.60.96Zm.9134.1.A1_atBM266802--4e-9At1g67600-O.I.H.G.S.X.
0.2724.60.97Zm.10972.1.A1_atAI783258hypothetical protein AY107822-3e-6At5g64500membrane protein-relatedO.I.H.G.S.X.
0.2724.60.98Zm.5616.1.A1_atCK368985threonine endopeptidase-2e+0At4g12270copper amine oxidase family proteinO.I.H.G.S.X.
0.2622.70.96Zm.7516.1.A1_atBM268858--4e-1At2g20270glutaredoxin family proteinO.I.H.G.S.X.
0.2622.70.97Zm.3423.1.A1_atAY110813.1hypothetical protein LOC100280412-3e-3At4g24040TRE1 (TREHALASE 1)O.I.H.G.S.X.
0.2622.70.97Zm.13788.1.S1_atAW313252thioredoxin reductase 2-5e-5At4g35460NTRB (NADPH-DEPENDENT THIOREDOXIN REDUCTASE B)O.I.H.G.S.X.
0.2521.30.94Zm.8040.2.A1_atAI665386hypothetical protein LOC100277542-3e+0At3g19130ATRBP47B (RNA-binding protein 47B)O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.098.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.898.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.498.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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