Co-expression analysis

Gene ID Zm.10479.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g13990: ATEXO70C2 (exocyst subunit EXO70 family protein C2) (HF=5e+0)
Module size 6 genes
NF 0.55
%ile 71.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.20.97Zm.10479.1.S1_atBQ486450--5e+0At5g13990ATEXO70C2 (exocyst subunit EXO70 family protein C2)O.I.H.G.S.X.
0.6381.10.97Zm.7620.1.A1_atCF629426hypothetical protein LOC100279978-2e-3At2g24010scpl23 (serine carboxypeptidase-like 23)O.I.H.G.S.X.
0.5571.60.97Zm.1158.1.A1_atAY107067.1--4e-31At5g10270CDKCO.I.H.G.S.X.
0.5369.10.97Zm.6293.1.A1_atCF038760hypothetical protein LOC100216905-4e+0At5g08400unknown proteinO.I.H.G.S.X.
0.4658.40.97Zm.2810.1.S1_atCK371548calcitonin peptide-receptor component protein-7e-1At1g18170immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.H.G.S.X.
0.2928.10.98Zm.7941.1.A1_atBM080529--1e+0At3g50040unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.098.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.898.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.498.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os12g0165600, orthologous to the query gene, Zm.10479.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6079.7Os12g0165600At5g13990-Exo70 exocyst complex subunit family protein6e-5At5g13990ATEXO70C2 (exocyst subunit EXO70 family protein C2)O.I.H.G.S.X.
0.7189.6Os12g0228800At5g13990-Calmodulin-like protein9e-11At4g03290calcium-binding protein, putativeO.I.H.G.S.X.
0.7189.6Os01g0640600At5g13990-LIMONENE cyclase like protein5e-2At1g75550glycine-rich proteinO.I.H.G.S.X.
0.6787.2Os02g0833000At5g13990-Serine/threonine-protein kinase PBS1 (EC 2.7.1.37)(AvrPphB susceptible protein 1)2e-1At4g21830methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinO.I.H.G.S.X.
0.6787.2Os09g0434600At5g13990-Conserved hypothetical protein1e-3At5g60700glycosyltransferase family protein 2O.I.H.G.S.X.
0.6181.2Os05g0577200At5g13990-Esterase/lipase/thioesterase domain containingprotein2e-17At1g26120esterase-relatedO.I.H.G.S.X.
0.5676.3Os06g0708400At5g13990-Cyclophilin3e-19At4g39220ATRER1AO.I.H.G.S.X.
0.5068.0Os12g0141100At5g13990-Phosphatidylinositol-4-phosphate 5-kinase familyprotein3e-14At3g56960PIP5K4 (PHOSPHATIDYL INOSITOL MONOPHOSPHATE 5 KINASE 4)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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