Co-expression analysis

Gene ID	Zm.10467.1.S1_at
Gene name	hypothetical protein LOC100274742
Homology with Arabidopsis	Similar to At2g27580: zinc finger (AN1-like) family protein (HF=1e+0)
Module size	10 genes
NF	0.67
%ile	89.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	69.1	0.92	Zm.10467.1.S1_at	CA826991	hypothetical protein LOC100274742	-	1e+0	At2g27580	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.95	Zm.19149.1.S1_at	CO526376	hypothetical protein LOC100272365	-	2e-1	At3g44020	thylakoid lumenal P17.1 protein	O.I.	H.G.	S.X.	Please select
0.75	90.8	0.97	Zm.11685.1.A1_at	BM379931	hypothetical protein LOC100194378	-	3e-1	At1g72645	unknown protein	O.I.	H.G.	S.X.	Please select
0.74	90.3	0.96	Zm.3642.1.A1_at	CA404841	hypothetical protein LOC100273944	-	1e-1	At1g63522	-	O.I.	H.G.	S.X.	Please select
0.74	90.3	0.96	ZmAffx.135.1.A1_at	AI667706	purine permease	-	3e+0	At2g43540	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	88.2	0.95	Zm.5314.1.A1_at	CF637974	transcription initiation factor IIF, alpha subunit	-	4e-11	At4g12610	transcription initiation factor IIF alpha subunit (TFIIF-alpha) family protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.97	Zm.11811.1.S1_at	CF052353	glycosyltransferase 5 /// glycosyltransferase 5	-	3e-10	At3g62720	XT1 (XYLOSYLTRANSFERASE 1)	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.96	ZmAffx.535.1.S1_at	AI711782	-	-	2e-1	At1g23270	unknown protein	O.I.	H.G.	S.X.	Please select
0.52	67.3	0.95	Zm.8561.1.A1_at	BM336075	-	-	1e-3	At1g02070	unknown protein	O.I.	H.G.	S.X.	Please select
0.48	61.3	0.94	Zm.18100.2.S1_at	BM380336	hypothetical protein LOC100191739	-	6e+0	At1g03700	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
21.3	99.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.8	99.4	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.3	99.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.6	99.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.9	99.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.2	99.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.0	99.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.0	99.0	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.7	98.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.2	96.0	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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