Co-expression analysis

Gene ID	Zm.10462.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g15660: AGL95 (AGAMOUS-LIKE 95) (HF=4e-1)
Module size	6 genes
NF	0.05
%ile	2.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	65.7	0.91	Zm.10462.1.S1_at	CF010422	-	-	4e-1	At2g15660	AGL95 (AGAMOUS-LIKE 95)	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.90	Zm.15678.2.A1_x_at	CF632171	-	-	5e+0	At1g43130	LCV2 (LIKE COV 2)	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.90	Zm.13710.1.S1_at	AY106560.1	-	-	9e-1	At3g55000	TON1A (TONNEAU 1)	O.I.	H.G.	S.X.	Please select
0.09	4.0	0.89	Zm.761.1.S1_at	CF053892	hypothetical protein LOC100192991	-	6e-37	At1g26630	FBR12 (FUMONISIN B1-RESISTANT12)	O.I.	H.G.	S.X.	Please select
0.04	1.5	0.90	Zm.12885.1.A1_at	AW231493	-	-	4e+0	At4g25570	ACYB-2	O.I.	H.G.	S.X.	Please select
0.02	0.7	0.89	Zm.12635.1.S1_s_at	BQ779227	Histone H4 /// GATA transcription factor 19	-	6e+0	At1g55520	TBP2 (TATA BINDING PROTEIN 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.2	99.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.8	99.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.6	99.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.5	99.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.9	98.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.4	98.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.1	98.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.6	98.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.1	97.4	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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