Co-expression analysis

Gene ID	Zm.10423.1.S1_at
Gene name	fatty acid desaturase8
Homology with Arabidopsis	Similar to At5g05580: FAD8 (FATTY ACID DESATURASE 8) (HF=6e-14)
Module size	19 genes
NF	0.53
%ile	69.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	79.5	0.96	Zm.10423.1.S1_at	CN844467	fatty acid desaturase8	-	6e-14	At5g05580	FAD8 (FATTY ACID DESATURASE 8)	O.I.	H.G.	S.X.	Please select
0.68	86.1	0.98	Zm.3707.1.A1_at	AY107773.1	vacuolar cation/proton exchanger 2	-	1e-4	At3g13320	CAX2 (CATION EXCHANGER 2)	O.I.	H.G.	S.X.	Please select
0.65	82.1	0.98	Zm.737.2.A1_at	AI746142	-	-	4e-6	At5g60360	AALP (Arabidopsis aleurain-like protease)	O.I.	H.G.	S.X.	Please select
0.64	81.7	0.98	Zm.2678.1.A1_at	BM339111	hypothetical protein LOC100193236	-	2e-1	At1g05180	AXR1 (AUXIN RESISTANT 1)	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.97	Zm.4549.1.A1_at	CK144436	hypothetical protein LOC100272569	-	1e-6	At5g55530	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.98	Zm.18474.1.A1_at	CO531196	hypothetical protein LOC100192651	-	6e+0	At5g61997	unknown protein	O.I.	H.G.	S.X.	Please select
0.58	75.1	0.98	Zm.6439.2.A1_at	AI881500	eucaryotic initiation factor7	-	7e-14	At5g35620	LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1)	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.97	Zm.375.1.S1_at	AF057184.1	trypsin inhibitor	-	1e-1	At5g02440	unknown protein	O.I.	H.G.	S.X.	Please select
0.54	69.8	0.98	Zm.1967.2.A1_at	CF637323	pre-mRNA-splicing factor prp45	-	6e-26	At1g77180	chromatin protein family	O.I.	H.G.	S.X.	Please select
0.51	66.4	0.98	Zm.18125.1.S1_at	CN844337	-	-	4e-1	At3g47380	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.10287.1.S1_at	BM736731	-	-	1e+0	At2g45250	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.17660.1.S1_at	AY106360.1	-	-	4e-1	At4g39720	VQ motif-containing protein	O.I.	H.G.	S.X.	Please select
0.49	61.9	0.97	Zm.19138.1.S1_at	CO525589	hypothetical protein LOC100277966	-	5e-1	At2g46300	-	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.98	Zm.11992.1.A1_at	BM382475	-	-	3e+0	At5g41614	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.98	Zm.2713.2.S1_a_at	AI881541	-	-	1e-30	At5g60790	ATGCN1	O.I.	H.G.	S.X.	Please select
0.39	45.6	0.98	Zm.17172.1.A1_at	AI664919	-	-	2e+0	At1g55675	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	45.6	0.99	Zm.13202.1.A1_at	CA403491	hypothetical protein LOC100273129	-	1e-8	At1g56590	clathrin adaptor complexes medium subunit family protein	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.98	Zm.12736.2.A1_at	AI881252	-	-	5e+0	At4g25720	QC (GLUTAMINYL CYCLASE)	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.98	Zm.5729.1.A1_at	AI637125	peptidoglycan binding domain containing protein	-	3e-23	At4g13670	PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.1	98.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.4	97.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9	97.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.7	97.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM290553	WS1 with array type maize from Affymetrix	GSE11531	Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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