Co-expression analysis

Gene ID Zm.10376.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g13510: unknown protein (HF=2e-11)
Module size 10 genes
NF 0.56
%ile 74.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.10.96Zm.10376.1.S1_atBQ538350--2e-11At3g13510unknown proteinO.I.H.G.S.X.
0.7087.00.97Zm.3358.2.S1_atAY105740.1--7e+0At2g44420protein N-terminal asparagine amidohydrolase family proteinO.I.H.G.S.X.
0.6986.50.96Zm.7826.2.A1_atAY107684.1--5e+0At4g22517-O.I.H.G.S.X.
0.6481.70.97Zm.18351.1.S1_atCO529439--2e+0At2g21140ATPRP2 (PROLINE-RICH PROTEIN 2)O.I.H.G.S.X.
0.6077.80.97Zm.5022.1.S1_atBM074052hypothetical protein LOC100279516-1e-17At1g67800copine-relatedO.I.H.G.S.X.
0.5469.80.97Zm.18352.1.S1_atCO527044glucan endo-1,3-beta-glucosidase, acidic isoform-1e+1At5g62470MYB96 (myb domain protein 96)O.I.H.G.S.X.
0.5369.10.98Zm.6149.1.A1_atCA399198omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-9e-1At5g43070WPP1 (WPP domain protein 1)O.I.H.G.S.X.
0.5267.30.96Zm.16982.1.A1_atCF972418--3e-10At3g44340CEF (clone eighty-four)O.I.H.G.S.X.
0.5065.70.97Zm.5165.1.A1_atAI715001gpm6 protein-5e+0At5g0385040S ribosomal protein S28 (RPS28B)O.I.H.G.S.X.
0.3437.20.97Zm.14349.1.S1_atCO532249hypothetical protein LOC100272339-3e+0At5g160103-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.897.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.696.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.291.3GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage