Co-expression analysis

Gene ID Zm.10375.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g35360: ubiquitin family protein (HF=2e-17)
Module size 6 genes
NF 0.36
%ile 37.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.80.98Zm.10375.1.S1_atBQ703821--2e-17At2g35360ubiquitin family proteinO.I.H.G.S.X.
0.6785.80.98Zm.9361.1.A1_atBM349541--5e+0At4g09580-O.I.H.G.S.X.
0.5065.70.99Zm.8911.1.A1_atBM350783--4e-2At5g2354026S proteasome regulatory subunit, putativeO.I.H.G.S.X.
0.3336.00.98Zm.15314.1.S1_atCF972544--1e-11At3g06080unknown proteinO.I.H.G.S.X.
0.2724.60.99Zm.2269.1.S1_atCF631922--1e-7At5g51820PGM (PHOSPHOGLUCOMUTASE)O.I.H.G.S.X.
0.136.80.98Zm.4183.1.A1_atAI857198--4e-1At4g03113unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.798.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.097.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.097.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320445protocol: mRNA - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM375788Deep-sowing 10d treatment Control, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing conditionLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.65454.1.S1_at, orthologous to the query gene, Zm.10375.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.6GmaAffx.65454.1.S1_atAt2g35360--4e-15At3g15380choline transporter-relatedO.I.H.G.S.X.
0.4463.3Gma.3102.1.S1_atAt2g35360--2e+0At1g22900-O.I.H.G.S.X.
0.2126.6GmaAffx.59321.1.S1_atAt2g35360--1e+0At2g30990unknown proteinO.I.H.G.S.X.
0.1215.1Gma.8059.1.S1_atAt2g35360--2e+0At4g40050signal transducerO.I.H.G.S.X.
0.0912.0Gma.3926.1.S1_atAt2g35360--2e-38At1g04080PRP39O.I.H.G.S.X.
0.0811.0Gma.3754.1.S1_x_atAt2g35360--9e-2At3g18430calcium-binding EF hand family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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