Co-expression analysis

Gene ID Zm.10212.1.A1_at
Gene name hypothetical protein LOC100279565
Homology with ArabidopsisSimilar to At3g01200: AtRP2 (PPDK regulatory protein 2) (HF=3e-3)
Module size 6 genes
NF 0.63
%ile 84.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.97Zm.10212.1.A1_atCF026357hypothetical protein LOC100279565-3e-3At3g01200AtRP2 (PPDK regulatory protein 2)O.I.H.G.S.X.
0.7389.90.97Zm.4723.1.A1_atAI738199--1e+1At5g64800CLE21 (CLAVATA3/ESR-RELATED 21)O.I.H.G.S.X.
0.6077.80.97Zm.4599.1.A1_atBM078509hypothetical protein LOC100192691-4e+0At3g22183unknown proteinO.I.H.G.S.X.
0.5674.40.97Zm.11697.1.A1_atCF272745--1e+0At4g04620ATG8B (autophagy 8b)O.I.H.G.S.X.
0.5065.70.97Zm.6587.1.A1_atBM378727acyl CoA synthetase-1e-5At1g64400long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putativeO.I.H.G.S.X.
0.3844.20.97Zm.16413.2.A1_atCF635725polygalacturonase-2e-6At4g23820glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.798.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM206314Upper pulvinus 15 min total RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
8.498.1GSM206332Lower pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
7.297.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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