Co-expression analysis

Gene ID	Zm.10200.1.A1_at
Gene name	hypothetical protein LOC100274487
Homology with Arabidopsis	Similar to At4g30020: subtilase family protein (HF=4e-6)
Module size	10 genes
NF	0.41
%ile	46.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.52	67.3	0.91	Zm.10200.1.A1_at	BM379455	hypothetical protein LOC100274487	-	4e-6	At4g30020	subtilase family protein	O.I.	H.G.	S.X.	Please select
0.54	69.8	0.93	Zm.4359.2.A1_at	AI795776	EMB2756	-	2e+0	At5g52160	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.94	Zm.6023.1.S1_at	AY059648.1	alternative oxidase AOX3 precursor	-	1e-5	At1g32350	AOX1D (alternative oxidase 1D)	O.I.	H.G.	S.X.	Please select
0.48	61.3	0.93	Zm.8142.1.A1_at	BM080424	hypothetical protein LOC100275043	-	4e-4	At1g05420	OFP12 (OVATE FAMILY PROTEIN 12)	O.I.	H.G.	S.X.	Please select
0.39	45.6	0.93	Zm.8677.1.A1_at	CO531412	structural constituent of ribosome	-	2e-1	At3g26147	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.94	Zm.5132.1.A1_at	AY105555.1	calcium lipid binding protein-like	-	7e-1	At1g15320	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.95	Zm.3454.1.S1_at	AW282335	sex determination protein tasselseed-2	-	3e+0	At2g27130	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.94	ZmAffx.1053.1.A1_at	AI881846	-	-	3e+0	At1g16240	SYP51 (SYNTAXIN OF PLANTS 51)	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.93	Zm.8993.1.A1_at	AI649732	hypothetical protein LOC100194128	-	2e-27	At5g57655	xylose isomerase family protein	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.95	Zm.19103.1.S1_at	CF625279	hypothetical protein LOC100193224	-	3e+0	At4g09490	RNase H domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.5	97.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.2	97.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9	97.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9	97.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.3	96.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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