| Gene ID | Zm.10175.1.A1_at |
| Gene name | hypothetical protein LOC100279966 /// pathogenesis-related protein 10 |
| Homology with Arabidopsis | Similar to At4g18692: unknown protein (HF=7e+0) |
| Module size | 7 genes |
| NF | 0.36 |
| %ile | 38.5 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.60 | 77.8 | 0.97 | Zm.10175.1.A1_at | BM379420 | hypothetical protein LOC100279966 /// pathogenesis-related protein 10 | - | 7e+0 | At4g18692 | unknown protein | O.I. | H.G. | S.X. | |
| 0.43 | 52.8 | 0.97 | Zm.3773.1.S1_at | AY110209.1 | hypothetical protein LOC100193094 | - | 4e+0 | At4g18620 | - | O.I. | H.G. | S.X. | |
| 0.43 | 52.8 | 0.97 | Zm.2715.1.A1_at | AW066985 | - | - | 5e+0 | At4g12990 | unknown protein | O.I. | H.G. | S.X. | |
| 0.35 | 38.9 | 0.97 | Zm.5962.1.S1_a_at | AY241545.1 | glyoxalase I | - | 1e-17 | At1g11840 | ATGLX1 (GLYOXALASE I HOMOLOG) | O.I. | H.G. | S.X. | |
| 0.29 | 28.1 | 0.97 | Zm.13760.1.A1_at | AY105817.1 | - | - | 5e+0 | At5g27280 | zinc finger (DNL type) family protein | O.I. | H.G. | S.X. | |
| 0.26 | 22.7 | 0.97 | Zm.4860.2.A1_at | AI770577 | - | - | 3e+0 | At2g34140 | Dof-type zinc finger domain-containing protein | O.I. | H.G. | S.X. | |
| 0.21 | 15.5 | 0.97 | Zm.4823.1.A1_at | CD999070 | - | - | 4e-23 | At1g76550 | pyrophosphate--fructose-6-phosphate 1-phosphotransferase alpha subunit, putative / pyrophosphate-dependent 6-phosphofructose-1-kinase, putative | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 11.3 | 98.5 | GSM320445 | protocol: mRNA - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.4 | 98.3 | GSM320446 | protocol: mRNA - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.3 | 97.4 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.3 | 97.4 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.0 | 97.3 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.6 | 97.1 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.3 | 96.1 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.3 | 96.1 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.3 | 96.1 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.5 | 95.1 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.71 | 87.8 | GmaAffx.90753.1.S1_s_at | At4g18692 | - | - | 1e+0 | At5g49300 | zinc finger (GATA type) family protein | O.I. | H.G. | S.X. | |
| 0.50 | 71.7 | Gma.1615.1.S1_at | At4g18692 | - | - | 3e-2 | At2g41410 | calmodulin, putative | O.I. | H.G. | S.X. | |
| 0.06 | 9.0 | Gma.9135.2.S1_at | At4g18692 | - | - | 5e-2 | At2g02130 | LCR68 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 68) | O.I. | H.G. | S.X. | |
| 0.03 | 5.8 | GmaAffx.90106.1.S1_s_at | At4g18692 | - | - | 2e-35 | At3g44110 | ATJ3 | O.I. | H.G. | S.X. | |
| 0.02 | 4.5 | Gma.6758.2.S1_at | At4g18692 | - | - | 4e-7 | At2g41420 | proline-rich family protein | O.I. | H.G. | S.X. | |
| 0.01 | 3.4 | Gma.14624.2.S1_a_at | At4g18692 | - | - | 9e-29 | At1g07410 | ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Hordeum_vulgare |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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