Co-expression analysis

Gene ID	Zm.10131.1.A1_at
Gene name	hypothetical protein LOC100273383
Homology with Arabidopsis	Similar to At5g63230: - (HF=3e-1)
Module size	32 genes
NF	0.61
%ile	81.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.90	97.0	0.82	Zm.10131.1.A1_at	BG873885	hypothetical protein LOC100273383	-	3e-1	At5g63230	-	O.I.	H.G.	S.X.	Please select
0.85	95.9	0.91	Zm.19031.1.A1_at	BU051425	-	-	2e-5	At2g01730	ATCPSF73-II (cleavage and polyadenylation specificity factor 73 kDa subunit-II)	O.I.	H.G.	S.X.	Please select
0.83	95.6	0.91	ZmAffx.459.1.A1_at	AI677212	-	-	8e-1	At1g26910	60S ribosomal protein L10 (RPL10B)	O.I.	H.G.	S.X.	Please select
0.78	92.5	0.93	Zm.2925.2.S1_at	BG836389	-	-	4e-63	At2g47110	UBQ6	O.I.	H.G.	S.X.	Please select
0.77	92.1	0.92	Zm.19030.1.A1_at	AW179359	hypothetical protein LOC100279586	-	1e-1	At1g63855	unknown protein	O.I.	H.G.	S.X.	Please select
0.77	92.1	0.88	Zm.13306.1.A1_at	BQ048230	DNA-damage-repair/toleration protein DRT102	-	6e-1	At5g10625	-	O.I.	H.G.	S.X.	Please select
0.76	91.1	0.92	Zm.1546.2.S1_a_at	CB411210	hypothetical protein LOC100278775	-	3e-4	At1g15270	-	O.I.	H.G.	S.X.	Please select
0.74	90.3	0.92	Zm.15590.1.A1_at	CD448259	hypothetical protein LOC100277246	-	1e+0	At1g48730	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.92	Zm.10226.1.A1_at	BM332464	-	-	4e+0	At2g13720	ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.86	Zm.2974.1.A1_at	AW120131	-	-	1e+0	At1g28610	GDSL-motif lipase, putative	O.I.	H.G.	S.X.	Please select
0.69	86.5	0.90	Zm.12881.1.A1_at	CA401025	Hypothetical protein LOC100194150	-	1e+0	At2g16980	tetracycline transporter	O.I.	H.G.	S.X.	Please select
0.68	86.1	0.87	ZmAffx.47.1.A1_at	AI664954	hypothetical protein LOC100193281	-	8e-1	At2g37030	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.66	82.3	0.86	Zm.14951.4.S1_at	BM380686	S-adenosylmethionine decarboxylase proenzyme	-	7e-11	At3g02470	SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)	O.I.	H.G.	S.X.	Please select
0.62	79.8	0.94	Zm.12923.1.A1_at	CF021555	cytosolic purine 5-nucleotidase	-	3e-5	At1g75210	5' nucleotidase family protein	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.95	ZmAffx.160.1.S1_at	AI668152	-	-	8e-1	At4g24380	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.88	Zm.15732.1.A1_at	AY104940.1	-	-	6e-9	At3g06980	DEAD/DEAH box helicase, putative	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.91	Zm.13299.1.S1_at	BQ486451	-	-	4e+0	At3g08780	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.85	Zm.3892.10.A1_x_at	AI691846	Elongation factor 1 alpha	-	1e-19	At1g35550	elongation factor Tu C-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.88	Zm.17752.1.A1_at	CK371155	-	-	4e+0	At5g13750	ZIFL1 (ZINC INDUCED FACILITATOR-like 1)	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.94	Zm.15680.1.A1_at	CA405039	hypothetical protein LOC100277476	-	7e+0	At3g43153	cAMP-dependent protein kinase inhibitor-related	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.93	Zm.18467.1.S1_at	AY107639.1	-	-	5e+0	At5g35920	CYP79A4P	O.I.	H.G.	S.X.	Please select
0.54	69.8	0.92	Zm.13112.1.A1_at	AY110231.1	-	-	3e-10	At5g63420	emb2746 (embryo defective 2746)	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.88	ZmAffx.980.1.A1_at	AI714647	hypothetical protein LOC100277796	-	3e+0	At4g28485	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.88	Zm.8239.1.A1_s_at	BM073390	hypothetical protein LOC100277448	-	5e+0	At5g46430	60S ribosomal protein L32 (RPL32B)	O.I.	H.G.	S.X.	Please select
0.52	67.3	0.91	Zm.15735.1.S1_at	CD439760	-	-	2e+0	At1g76590	zinc-binding family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.90	Zm.12924.1.S1_at	CA401736	flavin monooxygenase	-	8e-4	At1g21430	YUC11	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.96	Zm.18503.1.A1_at	CO518080	-	-	2e+1	At3g12145	FLR1	O.I.	H.G.	S.X.	Please select
0.49	61.9	0.94	Zm.3990.1.S1_at	CF244104	-	-	5e-4	At5g49830	-	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.86	Zm.3986.1.A1_at	AY108648.1	vacuolar ATPase subunit H protein	-	4e-9	At3g42050	vacuolar ATP synthase subunit H family protein	O.I.	H.G.	S.X.	Please select
0.41	49.7	0.89	Zm.5743.1.A1_at	CF045866	catalytic/ hydrolase	-	4e+0	At5g10360	EMB3010 (embryo defective 3010)	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.85	Zm.12796.1.A1_at	CA403456	hypothetical protein LOC100276862	-	2e-7	At1g07040	unknown protein	O.I.	H.G.	S.X.	Please select
0.37	42.3	0.89	Zm.17603.1.S1_at	CK371256	-	-	7e+0	At5g44920	Toll-Interleukin-Resistance (TIR) domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.6	97.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.7	96.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.9	95.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.9	95.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.8	95.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.2	94.5	GSM320445	protocol: mRNA - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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