Co-expression analysis

Gene ID	Zm.10125.1.A1_a_at
Gene name	cytidine/deoxycytidylate deaminase family protein
Homology with Arabidopsis	Similar to At5g29807: unknown protein (HF=5e-1)
Module size	6 genes
NF	0.32
%ile	30.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	71.6	0.96	Zm.10125.1.A1_a_at	CF628795	cytidine/deoxycytidylate deaminase family protein	-	5e-1	At5g29807	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.96	Zm.5502.1.A1_at	BM378399	hypothetical protein LOC100274214	-	1e-2	At1g14330	kelch repeat-containing F-box family protein	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.96	Zm.19034.1.S1_at	BQ833817	-	-	1e+1	At4g32900	aminoacyl-tRNA hydrolase	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.96	Zm.17671.1.S1_at	CK369711	-	-	3e+0	At2g39510	nodulin MtN21 family protein	O.I.	H.G.	S.X.	Please select
0.20	14.2	0.97	Zm.11708.1.A1_at	BM380110	hypothetical protein LOC100279180	-	5e+0	At3g61530	PANB2	O.I.	H.G.	S.X.	Please select
0.14	7.7	0.96	ZmAffx.934.1.A1_at	AI795526	-	-	2e-1	At2g45990	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.9	97.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320471	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8	97.2	GSM320473	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320470	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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