Co-expression analysis

Gene ID Zm.10077.1.A1_at
Gene name glycine-rich protein
Homology with ArabidopsisSimilar to At3g07560: PEX13 (PEROXIN 13) (HF=7e-1)
Module size 7 genes
NF 0.41
%ile 46.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.20.97Zm.10077.1.A1_atCA399756glycine-rich protein-7e-1At3g07560PEX13 (PEROXIN 13)O.I.H.G.S.X.
0.4352.80.97Zm.12958.1.A1_atCA402421hypothetical protein LOC100217276-9e+0At5g43245unknown proteinO.I.H.G.S.X.
0.4048.50.98Zm.19146.1.A1_atCO533664hypothetical protein LOC100193961-5e-1At3g09050unknown proteinO.I.H.G.S.X.
0.3844.20.97Zm.13026.1.A1_a_atAY111398.1--3e-1At4g28930unknown proteinO.I.H.G.S.X.
0.3029.80.97Zm.9852.1.A1_atBM381073syntaxin 121-5e-3At5g63740zinc finger protein-relatedO.I.H.G.S.X.
0.3029.80.97Zm.36.2.S1_a_atAF461049.1delta zein structural10-9e-2At2g45110ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4)O.I.H.G.S.X.
0.2928.10.98Zm.19335.1.A1_atCO521700hypothetical protein LOC100279445-6e-4At3g22440hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.697.9GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
5.296.9GSM385710Deep-sowing 10d treatment TIBA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
4.696.4GSM253278ZM_8d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.795.4GSM253265ZM_4d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.695.2GSM253279ZM_8d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.695.2GSM253267ZM_4d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.494.9GSM253277ZM_8d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.394.7GSM323172Zm_SG200Dpep1_24hpi_IIIGSE12892Maize gene expression during infection with Ustilago maydis strain SG200Dpep1Link to GEO
3.094.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1621475_at, orthologous to the query gene, Zm.10077.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6988.31621475_atAt3g07560--4e+0At1g73650oxidoreductase, acting on the CH-CH group of donorsO.I.H.G.S.X.
0.5577.31616694_atAt3g07560hypothetical protein LOC100250410-2e+0At3g29350AHP2 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 2)O.I.H.G.S.X.
0.5475.71615244_atAt3g07560--4e+0At5g16390CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)O.I.H.G.S.X.
0.4260.11616005_atAt3g07560--2e-2At4g39730lipid-associated family proteinO.I.H.G.S.X.
0.4057.71621641_atAt3g07560hypothetical protein LOC100256711-6e-2At2g32020GCN5-related N-acetyltransferase (GNAT) family proteinO.I.H.G.S.X.
0.3954.91621003_atAt3g07560similar to HB2 homeodomain protein-2e-1At5g46700TRN2 (TORNADO 2)O.I.H.G.S.X.
0.3954.91619231_atAt3g07560hypothetical protein LOC100248953-2e+0At3g60440-O.I.H.G.S.X.
0.3954.91621880_s_atAt3g07560hypothetical protein LOC100262668-3e+0At5g14360ubiquitin family proteinO.I.H.G.S.X.
0.3751.71618875_s_atAt3g07560hypothetical protein LOC100266914-1e-1At1g51950IAA18 (INDOLE-3-ACETIC ACID INDUCIBLE 18)O.I.H.G.S.X.
0.3548.51618251_atAt3g07560--6e-9At3g5343060S ribosomal protein L12 (RPL12B)O.I.H.G.S.X.
0.3446.81609703_atAt3g07560similar to homeodomain protein ARBORKNOX1-2e-43At1g62360STM (SHOOT MERISTEMLESS)O.I.H.G.S.X.
0.3446.81615898_atAt3g07560hypothetical protein LOC100247526-6e-2At2g22100RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3446.81617526_s_atAt3g07560hypothetical protein LOC100250396-8e-1At2g10920unknown proteinO.I.H.G.S.X.
0.3345.71612135_atAt3g07560hypothetical protein LOC100265690-7e-11At5g58960GIL1 (GRAVITROPIC IN THE LIGHT)O.I.H.G.S.X.
0.3345.71622725_atAt3g07560hypothetical protein LOC100260366-7e+0At5g28490LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)O.I.H.G.S.X.
0.3345.71614094_atAt3g07560hypothetical protein LOC100255834-6e-43At4g08150KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA)O.I.H.G.S.X.
0.2937.71615462_atAt3g07560--5e+0At3g55520immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putativeO.I.H.G.S.X.
0.2937.71620170_atAt3g07560hypothetical protein LOC100246815-1e-4At4g36920AP2 (APETALA 2)O.I.H.G.S.X.
0.2837.71616785_atAt3g07560hypothetical protein LOC100259648-1e-32At4g14560IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE)O.I.H.G.S.X.
0.2530.51613945_atAt3g07560hypothetical protein LOC100262668-5e-1At5g40770ATPHB3 (PROHIBITIN 3)O.I.H.G.S.X.
0.2225.61607122_atAt3g07560hypothetical protein LOC100251438-3e+0At4g33985unknown proteinO.I.H.G.S.X.
0.2022.41619760_atAt3g07560--3e-5At1g61255-O.I.H.G.S.X.
0.1819.41610567_atAt3g07560--3e-5At3g48185unknown proteinO.I.H.G.S.X.
0.1616.71609590_s_atAt3g07560hypothetical protein LOC100253669-3e-25At2g34510-O.I.H.G.S.X.
0.1515.61606707_atAt3g07560hypothetical protein LOC100248187-2e-2At2g41630TFIIB (TRANSCRIPTION FACTOR II B)O.I.H.G.S.X.
0.1515.61608586_atAt3g07560hypothetical protein LOC100241814-4e-18At4g21960PRXR1O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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