Co-expression analysis

Gene ID Zm.10077.1.A1_at
Gene name glycine-rich protein
Homology with ArabidopsisSimilar to At3g07560: PEX13 (PEROXIN 13) (HF=7e-1)
Module size 7 genes
NF 0.41
%ile 46.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.20.97Zm.10077.1.A1_atCA399756glycine-rich protein-7e-1At3g07560PEX13 (PEROXIN 13)O.I.H.G.S.X.
0.4352.80.97Zm.12958.1.A1_atCA402421hypothetical protein LOC100217276-9e+0At5g43245unknown proteinO.I.H.G.S.X.
0.4048.50.98Zm.19146.1.A1_atCO533664hypothetical protein LOC100193961-5e-1At3g09050unknown proteinO.I.H.G.S.X.
0.3844.20.97Zm.13026.1.A1_a_atAY111398.1--3e-1At4g28930unknown proteinO.I.H.G.S.X.
0.3029.80.97Zm.9852.1.A1_atBM381073syntaxin 121-5e-3At5g63740zinc finger protein-relatedO.I.H.G.S.X.
0.3029.80.97Zm.36.2.S1_a_atAF461049.1delta zein structural10-9e-2At2g45110ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4)O.I.H.G.S.X.
0.2928.10.98Zm.19335.1.A1_atCO521700hypothetical protein LOC100279445-6e-4At3g22440hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.697.9GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
5.296.9GSM385710Deep-sowing 10d treatment TIBA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
4.696.4GSM253278ZM_8d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.795.4GSM253265ZM_4d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.695.2GSM253279ZM_8d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.695.2GSM253267ZM_4d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.494.9GSM253277ZM_8d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.394.7GSM323172Zm_SG200Dpep1_24hpi_IIIGSE12892Maize gene expression during infection with Ustilago maydis strain SG200Dpep1Link to GEO
3.094.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig12876_at, orthologous to the query gene, Zm.10077.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.3849.5Contig12876_atAt3g07560--3e+0At5g48710ubiquitin-relatedO.I.H.G.S.X.
0.3647.1Contig10662_atAt3g07560--2e-1At5g52660myb family transcription factorO.I.H.G.S.X.
0.3240.3Contig13544_atAt3g07560--5e-2At1g19300PARVUS (PARVUS)O.I.H.G.S.X.
0.2427.2Contig930_atAt3g07560--8e-35At5g19770TUA3O.I.H.G.S.X.
0.2224.2Contig6120_atAt3g07560--3e-6At3g01450bindingO.I.H.G.S.X.
0.1311.6Contig16555_atAt3g07560--6e-3At3g12685-O.I.H.G.S.X.
0.108.4Contig12099_atAt3g07560--7e+0At5g48480unknown proteinO.I.H.G.S.X.
0.075.8Contig8041_atAt3g07560--9e-2At4g28480DNAJ heat shock family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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