Co-expression analysis

Gene ID Zm.10076.1.S1_at
Gene name DAG protein
Homology with ArabidopsisSimilar to At1g32580: plastid developmental protein DAG, putative (HF=9e-15)
Module size 6 genes
NF 0.26
%ile 21.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.96Zm.10076.1.S1_atBM379471DAG protein-9e-15At1g32580plastid developmental protein DAG, putativeO.I.H.G.S.X.
0.3336.00.97Zm.2630.1.A1_atAW066591--3e+0At5g48545histidine triad family protein / HIT family proteinO.I.H.G.S.X.
0.3131.60.97Zm.10073.1.A1_atBM378953protein AATF-1e+0At1g75460ATP-dependent protease La (LON) domain-containing proteinO.I.H.G.S.X.
0.2724.60.97Zm.8972.1.S1_atCD435957hypothetical protein LOC100217237-7e-17At3g54320WRI1 (WRINKLED 1)O.I.H.G.S.X.
0.1912.80.97Zm.10077.1.A1_atCA399756glycine-rich protein-7e-1At3g07560PEX13 (PEROXIN 13)O.I.H.G.S.X.
0.083.40.97Zm.1240.1.A1_atAI001233hypothetical protein LOC100274890-6e-3At3g29034unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.797.9GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
3.394.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.893.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.793.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM206325Upper pulvinus 5 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.692.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
2.391.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.291.3GSM206307Lower pulvinus 5 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At1g32580, orthologous to the query gene, Zm.10076.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
1.00100.0At1g32580840152plastid developmental protein DAG, putativeF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.H.G.S.X.
0.5065.3At3g20330821577aspartate carabmoyltransferase, chloroplast / aspartate transcarbamylase / ATCase (PYRB)encodes aspartate carbamoyltransferase catalyzing the second step in the de novo pyrimidine ribonucleotide biosynthesisO.I.H.G.S.X.
0.4457.2At1g03860839228ATPHB2 (PROHIBITIN 2)prohibitin 2O.I.H.G.S.X.
0.4253.9At5g43960834419nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:transport, nucleocytoplasmic transport;C:intracellular;MPFOBVAO.I.H.G.S.X.
0.3541.6At1g04170839238EIF2 GAMMAprotein synthesis initiation factor eIF2 gammaO.I.H.G.S.X.
0.3338.1At1g74560843797NRP1 (NAP1-RELATED PROTEIN 1)Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP2. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.O.I.H.G.S.X.
0.3338.1At5g60990836220DEAD/DEAH box helicase, putative (RH10)F:helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding;P:unknown;C:cellular_component unknown;BOMFPAVO.I.H.G.S.X.
0.3235.7At1g54770841918-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.H.G.S.X.
0.3235.7At5g47320834779RPS19 (RIBOSOMAL PROTEIN S19)Nuclear encoded mitochondrial ribosome subunit.O.I.H.G.S.X.
0.2522.6At4g35490829701MRPL11 (MITOCHONDRIAL RIBOSOMAL PROTEIN L11)F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, intracellular;BOAMFPO.I.H.G.S.X.
0.1710.2At3g02220821238unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBAO.I.H.G.S.X.
0.157.8At4g25550828660protein bindingF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFPO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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