Gene ID | Zm.10073.1.A1_at |
Gene name | protein AATF |
Homology with Arabidopsis | Similar to At1g75460: ATP-dependent protease La (LON) domain-containing protein (HF=1e+0) |
Module size | 6 genes |
NF | 0.46 |
%ile | 55.7 |
VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0.77 | 92.1 | 0.97 | Zm.10073.1.A1_at | BM378953 | protein AATF | - | 1e+0 | At1g75460 | ATP-dependent protease La (LON) domain-containing protein | O.I. | H.G. | S.X. | |
0.60 | 77.8 | 0.97 | Zm.5990.1.S1_a_at | AY111300.1 | - | - | 2e-6 | At5g49980 | AFB5 (Auxin F-Box protein 5) | O.I. | H.G. | S.X. | |
0.44 | 55.7 | 0.98 | Zm.3903.1.S1_at | AW438311 | - | - | 1e+0 | At5g02110 | CYCD7 | O.I. | H.G. | S.X. | |
0.40 | 48.5 | 0.97 | Zm.8972.1.S1_at | CD435957 | hypothetical protein LOC100217237 | - | 7e-17 | At3g54320 | WRI1 (WRINKLED 1) | O.I. | H.G. | S.X. | |
0.35 | 38.9 | 0.98 | Zm.16705.1.S1_at | BM501579 | - | - | 3e-1 | At1g16430 | surfeit locus protein 5 family protein / SURF5 family protein | O.I. | H.G. | S.X. | |
0.29 | 28.1 | 0.97 | Zm.5976.2.S1_at | BG265782 | - | - | 3e+0 | At5g40080 | 60S ribosomal protein-related | O.I. | H.G. | S.X. |
Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
---|---|---|---|---|---|---|
12.6 | 98.7 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | ![]() |
11.7 | 98.6 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | ![]() |
10.7 | 98.5 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | ![]() |
10.6 | 98.4 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | ![]() |
10.3 | 98.4 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | ![]() |
9.6 | 98.3 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | ![]() |
9.4 | 98.3 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | ![]() |
9.0 | 98.2 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | ![]() |
6.8 | 97.6 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | ![]() |
5.3 | 96.9 | GSM320470 | protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | ![]() |
VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0.47 | 62.3 | Os01g0526200 | At1g75460 | - | Conserved hypothetical protein | 6e-5 | At5g61330 | rRNA processing protein-related | O.I. | H.G. | S.X. | |
0.63 | 82.7 | Os01g0271500 | At1g75460 | - | RUB-activating enzyme (Ubiquitin activating enzymeE1 like protein) | 7e-17 | At5g19180 | ECR1 (E1 C-terminal related 1) | O.I. | H.G. | S.X. | |
0.50 | 68.0 | Os01g0177200 | At1g75460 | - | Ubiquitin-specific protease 14 | 3e-11 | At3g20630 | UBP14 (UBIQUITIN-SPECIFIC PROTEASE 14) | O.I. | H.G. | S.X. | |
0.44 | 58.1 | Os03g0116500 | At1g75460 | - | - | 1e-9 | At3g61140 | FUS6 (FUSCA 6) | O.I. | H.G. | S.X. | |
0.43 | 55.4 | Os05g0371200 | At1g75460 | - | 26S proteasome non-ATPase regulatory subunit 14(26S proteasome regulatory subunit rpn11) | 6e-41 | At5g23540 | 26S proteasome regulatory subunit, putative | O.I. | H.G. | S.X. | |
0.35 | 41.7 | Os10g0412100 | At1g75460 | - | Endonuclease/exonuclease/phosphatase familyprotein | 2e-14 | At3g58560 | endonuclease/exonuclease/phosphatase family protein | O.I. | H.G. | S.X. |
Arabidopsis_thaliana |
Glycine_max |
Hordeum_vulgare |
Populus_trichocarpa |
Triticum_aestivum |
Vitis_vinifera |
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